RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 UQCRFS1P1P0C7P4 283 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 KARSQ15046 597 aaKnown RBP11.37□□□□□ -0.59
PSEN1-204ENST00000394164 UBE3CQ15386 1083 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 CCDC152Q4G0S7 254 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 ANO1Q5XXA6 986 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 MFSD6Q6ZSS7 791 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 PDILTQ8N807 584 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 UBXN6Q9BZV1 441 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-204ENST00000394164 ABCC6O95255 1503 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 ITGB4P16144 1822 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 GSG1L2A8MUP6 293 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 CAMTA2O94983 1202 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 DYNLL1P63167 89 aaKnown RBP11.37□□□□□ -0.59
PSEN1-204ENST00000394164 FMR1NBQ8N0W7 255 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-204ENST00000394164 DEF6Q9H4E7 631 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 TFCP2L1Q9NZI6 479 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 MTMR7Q9Y216 660 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 EP400Q96L91 3159 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 PLEKHG2Q9H7P9 1386 aa11.37□□□□□ -0.59
PSEN1-204ENST00000394164 MROH5Q6ZUA9 1318 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 PATL2C9JE40 543 aaKnown RBP11.36□□□□□ -0.59
PSEN1-204ENST00000394164 ZNF202O95125 648 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 CAVIN2O95810 425 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 FGFR2P21802 821 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 KLRK1P26718 216 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 ARID4AP29374 1257 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-204ENST00000394164 IGDCC4Q8TDY8 1250 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 DPF2Q92785 391 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 EXOC4Q96A65 974 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 NCAPGQ9BPX3 1015 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 NAT10Q9H0A0 1025 aaKnown RBP11.36□□□□□ -0.59
PSEN1-204ENST00000394164 RABEP2Q9H5N1 569 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 LY9Q9HBG7 655 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 RTEL1Q9NZ71 1219 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 MROH7-TTC4A0A0A0MT08 1334 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 ERVV-1B6SEH8 477 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 PFKFB1P16118 471 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 TRIM29Q14134 588 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 CTR9Q6PD62 1173 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 PHLPP2Q6ZVD8 1323 aa11.36□□□□□ -0.59
PSEN1-204ENST00000394164 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
PSEN1-204ENST00000394164 CT47A1Q5JQC4 288 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-204ENST00000394164 ADALQ6DHV7 355 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 DHX58Q96C10 678 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 DESI2Q9BSY9 194 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 IRX2Q9BZI1 471 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-204ENST00000394164 SRP68Q9UHB9 627 aaKnown RBP11.35□□□□□ -0.59
PSEN1-204ENST00000394164 SLIT2O94813 1529 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 SERPINC1P01008 464 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
PSEN1-204ENST00000394164 MAGEA9P43362 315 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 CPLX2Q6PUV4 134 aaKnown RBP11.35□□□□□ -0.59
PSEN1-204ENST00000394164 TMEM232C9JQI7 657 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 PSEN1P49768 467 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 NR5A1Q13285 461 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 PNOCQ13519 176 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 CFAP100Q494V2 611 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 AKNAD1Q5T1N1 836 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 MICALL1Q8N3F8 863 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 CELF1Q92879 486 aaKnown RBP11.35□□□□□ -0.59
PSEN1-204ENST00000394164 C8orf37Q96NL8 207 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 FAM217BQ9NTX9 383 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-204ENST00000394164 IMPACTQ9P2X3 320 aa11.35□□□□□ -0.59
PSEN1-204ENST00000394164 NUP98P52948 1817 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 FOXN1O15353 648 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 NTSR2O95665 410 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 FANCCQ00597 558 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 GRIN1Q05586 938 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
PSEN1-204ENST00000394164 PAPPAQ13219 1627 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 ABCA3Q99758 1704 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 VWA3AA6NCI4 1184 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 CTAGE5O15320 804 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 RHOXF2BP0C7M4 288 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 SSRP1Q08945 709 aaKnown RBP11.34□□□□□ -0.59
PSEN1-204ENST00000394164 WTAPQ15007 396 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 KCNG4Q8TDN1 519 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 RHOXF2Q9BQY4 288 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 NACAP1Q9BZK3 213 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 SPATA31A1Q5TZJ5 1347 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 TAF1P21675 1872 aa11.34□□□□□ -0.59
PSEN1-204ENST00000394164 CCDC12Q8WUD4 166 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-204ENST00000394164 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 ERICH2A1L162 156 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 TPM1P09493 284 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 SYKP43405 635 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 UBAC1Q9BSL1 405 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 KCND1Q9NSA2 647 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms