RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 AFG3L2Q9Y4W6 797 aa22.4■■□□□ 1.18
NME1-203ENST00000393196 SDSP20132 328 aa22.39■■□□□ 1.17
NME1-203ENST00000393196 ZNF280CQ8ND82 737 aa22.39■■□□□ 1.17
NME1-203ENST00000393196 CCDC17Q96LX7 622 aa22.39■■□□□ 1.17
NME1-203ENST00000393196 WDR18Q9BV38 432 aa22.39■■□□□ 1.17
NME1-203ENST00000393196 IGF2BP3O00425 579 aaKnown RBP eCLIP22.38■■□□□ 1.17
NME1-203ENST00000393196 SLC3A2P08195 630 aaKnown RBP22.38■■□□□ 1.17
NME1-203ENST00000393196 CTR9Q6PD62 1173 aa22.38■■□□□ 1.17
NME1-203ENST00000393196 ANKRD23Q86SG2 305 aa22.38■■□□□ 1.17
NME1-203ENST00000393196 NAPBQ9H115 298 aa22.38■■□□□ 1.17
NME1-203ENST00000393196 CDK5RAP2Q96SN8 1893 aa22.38■■□□□ 1.17
NME1-203ENST00000393196 DDX60LQ5H9U9 1706 aaKnown RBP22.37■■□□□ 1.17
NME1-203ENST00000393196 NAV1Q8NEY1 1877 aa22.37■■□□□ 1.17
NME1-203ENST00000393196 A0A0G2JLL6 359 aaPredicted RBP22.37■■□□□ 1.17
NME1-203ENST00000393196 SLURP2P0DP57 97 aa22.37■■□□□ 1.17
NME1-203ENST00000393196 SHMT1P34896 483 aa22.37■■□□□ 1.17
NME1-203ENST00000393196 LBX1P52954 281 aa22.37■■□□□ 1.17
NME1-203ENST00000393196 ABCB5Q2M3G0 1257 aa22.37■■□□□ 1.17
NME1-203ENST00000393196 C16orf86Q6ZW13 317 aa22.37■■□□□ 1.17
NME1-203ENST00000393196 PRRT2Q7Z6L0 340 aaPredicted RBP22.37■■□□□ 1.17
NME1-203ENST00000393196 IFNL3Q8IZI9 196 aa22.37■■□□□ 1.17
NME1-203ENST00000393196 SEC62Q99442 399 aaKnown RBP22.37■■□□□ 1.17
NME1-203ENST00000393196 NMIQ13287 307 aaPredicted RBP22.36■■□□□ 1.17
NME1-203ENST00000393196 ZFYVE28Q9HCC9 887 aa22.36■■□□□ 1.17
NME1-203ENST00000393196 SLC45A1Q9Y2W3 748 aa22.36■■□□□ 1.17
NME1-203ENST00000393196 MYH1P12882 1939 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 DOCK1Q14185 1865 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 TRIM75PA6NK02 468 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 GDF11O95390 407 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 GH2P01242 217 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 CYP2D6P10635 497 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 RRP1BQ14684 758 aaKnown RBP22.35■■□□□ 1.17
NME1-203ENST00000393196 PROCA1Q8NCQ7 364 aaPredicted RBP22.35■■□□□ 1.17
NME1-203ENST00000393196 FAM227BQ96M60 508 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 PTPN18Q99952 460 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 ROBO3Q96MS0 1386 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 LAMB1P07942 1786 aa22.35■■□□□ 1.17
NME1-203ENST00000393196 CCDC171Q6TFL3 1326 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 A0A0D9SFI3 127 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 C19orf81C9J6K1 198 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 BTBD19C9JJ37 291 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 CDK8P49336 464 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 SPP2Q13103 211 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 PABPC4Q13310 644 aaKnown RBP eCLIP22.34■■□□□ 1.172e-8■■■■■ 32.2
NME1-203ENST00000393196 TAF1CQ15572 869 aaPredicted RBP22.34■■□□□ 1.17
NME1-203ENST00000393196 ALX1Q15699 326 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 TMEM179Q6ZVK1 233 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 RUFY2Q8WXA3 655 aa22.34■■□□□ 1.17
NME1-203ENST00000393196 EPB41L4AQ9HCS5 686 aaPredicted RBP22.34■■□□□ 1.17
NME1-203ENST00000393196 ZMYM6O95789 1325 aa22.33■■□□□ 1.17
NME1-203ENST00000393196 MINDY4BA8MYZ0 360 aa22.33■■□□□ 1.17
NME1-203ENST00000393196 GSPT1P15170 499 aaKnown RBP22.33■■□□□ 1.17
NME1-203ENST00000393196 BACE1P56817 501 aa22.33■■□□□ 1.17
NME1-203ENST00000393196 MKNK2Q9HBH9 465 aa22.33■■□□□ 1.17
NME1-203ENST00000393196 PPP4R2Q9NY27 417 aa22.33■■□□□ 1.17
NME1-203ENST00000393196 TMOD4Q9NZQ9 345 aa22.33■■□□□ 1.17
NME1-203ENST00000393196 TSKSQ9UJT2 592 aa22.33■■□□□ 1.17
NME1-203ENST00000393196 SIPA1L1O43166 1804 aa22.33■■□□□ 1.16
NME1-203ENST00000393196 RAD50Q92878 1312 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 USP17L10C9JJH3 530 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 MPHOSPH10O00566 681 aaKnown RBP22.32■■□□□ 1.16
NME1-203ENST00000393196 TBC1D8O95759 1140 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 USP14P54578 494 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 PDE4BQ07343 736 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 RAB3GAP1Q15042 981 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 SH3D19Q5HYK7 790 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 GADL1Q6ZQY3 521 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 FAM43AQ8N2R8 423 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 DYNLL2Q96FJ2 89 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 PARK7Q99497 189 aaKnown RBP22.32■■□□□ 1.16
NME1-203ENST00000393196 SH2D4AQ9H788 454 aa22.32■■□□□ 1.16
NME1-203ENST00000393196 CYP2D7A0A087X1C5 515 aa22.31■■□□□ 1.16
NME1-203ENST00000393196 GPR25O00155 361 aa22.31■■□□□ 1.16
NME1-203ENST00000393196 CRHR2Q13324 411 aa22.31■■□□□ 1.16
NME1-203ENST00000393196 CWC27Q6UX04 472 aaKnown RBP22.31■■□□□ 1.16
NME1-203ENST00000393196 CCDC129Q6ZRS4 1044 aa22.31■■□□□ 1.16
NME1-203ENST00000393196 PNMA3Q9UL41 463 aa22.31■■□□□ 1.16
NME1-203ENST00000393196 AGTPBP1Q9UPW5 1226 aa22.31■■□□□ 1.16
NME1-203ENST00000393196 PDHXO00330 501 aa22.3■■□□□ 1.16
NME1-203ENST00000393196 MOGSQ13724 837 aa22.3■■□□□ 1.16
NME1-203ENST00000393196 SLC44A5Q8NCS7 719 aa22.3■■□□□ 1.16
NME1-203ENST00000393196 FEZ1Q99689 392 aa22.3■■□□□ 1.16
NME1-203ENST00000393196 FKTNO75072 461 aa22.29■■□□□ 1.16
NME1-203ENST00000393196 HMGCS2P54868 508 aa22.29■■□□□ 1.16
NME1-203ENST00000393196 PPARAQ07869 468 aa22.29■■□□□ 1.16
NME1-203ENST00000393196 MTMR2Q13614 643 aa22.29■■□□□ 1.16
NME1-203ENST00000393196 ARHGEF6Q15052 776 aa22.29■■□□□ 1.16
NME1-203ENST00000393196 USP17L2Q6R6M4 530 aa22.29■■□□□ 1.16
NME1-203ENST00000393196 CCDC84Q86UT8 332 aaPredicted RBP22.29■■□□□ 1.16
NME1-203ENST00000393196 KIAA1683Q9H0B3 1180 aa22.29■■□□□ 1.16
NME1-203ENST00000393196 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.29■■□□□ 1.16
NME1-203ENST00000393196 TLR2O60603 784 aa22.28■■□□□ 1.16
NME1-203ENST00000393196 HSPD1P10809 573 aaKnown RBP22.28■■□□□ 1.16
NME1-203ENST00000393196 NT5C2P49902 561 aa22.28■■□□□ 1.16
NME1-203ENST00000393196 JAG1P78504 1218 aa22.28■■□□□ 1.16
NME1-203ENST00000393196 BMP2KLQ5H9B9 411 aa22.28■■□□□ 1.16
NME1-203ENST00000393196 PPP4R3BQ5MIZ7 849 aa22.28■■□□□ 1.16
NME1-203ENST00000393196 GPAT2Q6NUI2 795 aa22.28■■□□□ 1.16
NME1-203ENST00000393196 ZNF444Q8N0Y2 327 aaPredicted RBP22.28■■□□□ 1.16
NME1-203ENST00000393196 KANSL2Q9H9L4 492 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms