RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 CRACR2BQ8N4Y2 399 aaPredicted RBP20.51■□□□□ 0.87
SHTN1-203ENST00000392901 RTN4Q9NQC3 1192 aaKnown RBP20.51■□□□□ 0.87
SHTN1-203ENST00000392901 STK36Q9NRP7 1315 aa20.51■□□□□ 0.87
SHTN1-203ENST00000392901 KIF28PB7ZC32 967 aa20.51■□□□□ 0.87
SHTN1-203ENST00000392901 TROAPQ12815 778 aa20.51■□□□□ 0.87
SHTN1-203ENST00000392901 TRIM29Q14134 588 aa20.51■□□□□ 0.87
SHTN1-203ENST00000392901 NBPF11Q86T75 865 aa20.51■□□□□ 0.87
SHTN1-203ENST00000392901 SLC16A10Q8TF71 515 aa20.51■□□□□ 0.87
SHTN1-203ENST00000392901 NAV1Q8NEY1 1877 aa20.51■□□□□ 0.87
SHTN1-203ENST00000392901 ROBO3Q96MS0 1386 aa20.5■□□□□ 0.87
SHTN1-203ENST00000392901 TSPY3P0CV98 308 aa20.5■□□□□ 0.87
SHTN1-203ENST00000392901 TSPY8P0CW00 308 aa20.5■□□□□ 0.87
SHTN1-203ENST00000392901 KIF23Q02241 960 aaPredicted RBP20.5■□□□□ 0.87
SHTN1-203ENST00000392901 KIAA0825Q8IV33 1275 aa20.5■□□□□ 0.87
SHTN1-203ENST00000392901 PGBD1Q96JS3 809 aa20.5■□□□□ 0.87
SHTN1-203ENST00000392901 LIG1P18858 919 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 WASF1Q92558 559 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 TEKT1Q969V4 418 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 TSPY26PQ9H489 355 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 IL17RBQ9NRM6 502 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 USP40Q9NVE5 1235 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 C10orf71Q711Q0 1435 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 CDK5RAP2Q96SN8 1893 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 USP17L3A6NCW0 530 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 USP17L4A6NCW7 530 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 CALM1P0DP23 149 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 CALM2P0DP24 149 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 CALM3P0DP25 149 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 STRIP1Q5VSL9 837 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 RCSD1Q6JBY9 416 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 USP17L1Q7RTZ2 530 aa20.49■□□□□ 0.87
SHTN1-203ENST00000392901 DDAH1O94760 285 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 DPEP1P16444 411 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 CDK8P49336 464 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 GNL2Q13823 731 aaKnown RBP20.48■□□□□ 0.87
SHTN1-203ENST00000392901 ATL3Q6DD88 541 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 BRAPQ7Z569 592 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 RNF214Q8ND24 703 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 ZNF287Q9HBT7 754 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 ZBTB7AO95365 584 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 PLEKHA8P1O95397 391 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 DEXIO95424 95 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 RASA1P20936 1047 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 KIAA2012Q0VF49 1180 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 DACT2Q5SW24 774 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 HHIPL2Q6UWX4 724 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 RCOR1Q9UKL0 485 aa20.48■□□□□ 0.87
SHTN1-203ENST00000392901 PPIP5K2O43314 1243 aa20.47■□□□□ 0.87
SHTN1-203ENST00000392901 CRKP46108 304 aa20.47■□□□□ 0.87
SHTN1-203ENST00000392901 MYSM1Q5VVJ2 828 aa20.47■□□□□ 0.87
SHTN1-203ENST00000392901 C16orf86Q6ZW13 317 aa20.47■□□□□ 0.87
SHTN1-203ENST00000392901 BICD2Q8TD16 824 aa20.47■□□□□ 0.87
SHTN1-203ENST00000392901 KAT14Q9H8E8 782 aa20.47■□□□□ 0.87
SHTN1-203ENST00000392901 DDX4Q9NQI0 724 aaKnown RBP20.47■□□□□ 0.87
SHTN1-203ENST00000392901 RBM28Q9NW13 759 aaKnown RBP20.47■□□□□ 0.87
SHTN1-203ENST00000392901 WDHD1O75717 1129 aaPredicted RBP20.46■□□□□ 0.87
SHTN1-203ENST00000392901 AKAP17AQ02040 695 aaKnown RBP20.46■□□□□ 0.87
SHTN1-203ENST00000392901 APOBEC3HQ6NTF7 200 aaKnown RBP20.46■□□□□ 0.87
SHTN1-203ENST00000392901 CDC42EP5Q6NZY7 148 aa20.46■□□□□ 0.87
SHTN1-203ENST00000392901 DGKHQ86XP1 1220 aa20.46■□□□□ 0.87
SHTN1-203ENST00000392901 RGS22Q8NE09 1264 aa20.46■□□□□ 0.87
SHTN1-203ENST00000392901 SUPT20HQ8NEM7 779 aa20.46■□□□□ 0.87
SHTN1-203ENST00000392901 CTCFLQ8NI51 663 aaPredicted RBP20.46■□□□□ 0.87
SHTN1-203ENST00000392901 hCG_1642624A0A1W2PR95 340 aa20.46■□□□□ 0.87
SHTN1-203ENST00000392901 KCNA3P22001 575 aa20.46■□□□□ 0.87
SHTN1-203ENST00000392901 RBM5P52756 815 aaKnown RBP eCLIP20.46■□□□□ 0.87
SHTN1-203ENST00000392901 RNF26Q9BY78 433 aaPredicted RBP20.46■□□□□ 0.87
SHTN1-203ENST00000392901 KCNJ14Q9UNX9 436 aa20.46■□□□□ 0.87
SHTN1-203ENST00000392901 LETM1O95202 739 aaPredicted RBP20.45■□□□□ 0.86
SHTN1-203ENST00000392901 NT5C2P49902 561 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 STX8Q9UNK0 236 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 PCDHAC2Q9Y5I4 1007 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 CLIC4Q9Y696 253 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 SNED1Q8TER0 1413 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 DLEC1Q9Y238 1755 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 SCN9AQ15858 1988 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 CCDC93Q567U6 631 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 RTEL1Q9NZ71 1219 aa20.45■□□□□ 0.86
SHTN1-203ENST00000392901 ATF5Q9Y2D1 282 aaPredicted RBP20.45■□□□□ 0.86
SHTN1-203ENST00000392901 V9GY48 417 aaPredicted RBP20.45■□□□□ 0.86
SHTN1-203ENST00000392901 MYH1P12882 1939 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 FUT2Q10981 343 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 TMTC3Q6ZXV5 915 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 PNMA1Q8ND90 353 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 ECM29Q5VYK3 1845 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 ME1P48163 572 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 TCP11L1Q9NUJ3 509 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 DACT1Q9NYF0 836 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 MTMR7Q9Y216 660 aa20.44■□□□□ 0.86
SHTN1-203ENST00000392901 ADAMTSL1Q8N6G6 1762 aa20.43■□□□□ 0.86
SHTN1-203ENST00000392901 MMP1P03956 469 aa20.43■□□□□ 0.86
SHTN1-203ENST00000392901 FKBP1AP62942 108 aaKnown RBP20.43■□□□□ 0.86
SHTN1-203ENST00000392901 CAMK4Q16566 473 aa20.43■□□□□ 0.86
SHTN1-203ENST00000392901 CCDC178Q5BJE1 867 aa20.43■□□□□ 0.86
SHTN1-203ENST00000392901 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
SHTN1-203ENST00000392901 SRBD1Q8N5C6 995 aaKnown RBP20.43■□□□□ 0.86
SHTN1-203ENST00000392901 ZDHHC15Q96MV8 337 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms