RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 RLBP1P12271 317 aa13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 TNNT3P45378 269 aaPredicted RBP13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 MVPQ14764 893 aaKnown RBP13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 SYAP1Q96A49 352 aaPredicted RBP13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 GCC1Q96CN9 775 aa13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 TTC12Q9H892 705 aaPredicted RBP13.36□□□□□ -0.27
TRAF3IP2-208ENST00000392556 SMTNL1A8MU46 457 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 CACNB3P54284 484 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 CDC42EP5Q6NZY7 148 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 ANKRD23Q86SG2 305 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 CDAN1Q8IWY9 1227 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 RNF214Q8ND24 703 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 IDI2Q9BXS1 227 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 BRMS1Q9HCU9 246 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 KCNG1Q9UIX4 513 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 HNRNPH2P55795 449 aaKnown RBP13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 MYCBPQ99417 103 aaPredicted RBP13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 SIL1Q9H173 461 aa13.35□□□□□ -0.27
TRAF3IP2-208ENST00000392556 CXCL11O14625 94 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 NPM3O75607 178 aaKnown RBP13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 RAD51AP2Q09MP3 1159 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 BMP2KLQ5H9B9 411 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 C17orf53Q8N3J3 647 aaPredicted RBP13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 PCDH10Q9P2E7 1040 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 GAKO14976 1311 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 MYH13Q9UKX3 1938 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 IRF6O14896 467 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 PRDX5P30044 214 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 ZNF397Q8NF99 534 aaPredicted RBP13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 NCAPGQ9BPX3 1015 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 RASSF4Q9H2L5 321 aa13.34□□□□□ -0.27
TRAF3IP2-208ENST00000392556 BTBD19C9JJ37 291 aa13.33□□□□□ -0.28
TRAF3IP2-208ENST00000392556 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
TRAF3IP2-208ENST00000392556 GTF2A1P52655 376 aaPredicted RBP13.33□□□□□ -0.28
TRAF3IP2-208ENST00000392556 RABEP1Q15276 862 aa13.33□□□□□ -0.28
TRAF3IP2-208ENST00000392556 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ZKSCAN4Q969J2 545 aaPredicted RBP13.33□□□□□ -0.28
TRAF3IP2-208ENST00000392556 MEIS3Q99687 375 aa13.33□□□□□ -0.28
TRAF3IP2-208ENST00000392556 SRGAP3O43295 1099 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ADCY5O95622 1261 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 LDHCP07864 332 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 HOXD10P28358 340 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 PHKA1P46020 1223 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 GSTO1P78417 241 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 DIXDC1Q155Q3 683 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 DZIP1Q86YF9 867 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 RSPH14Q9UHP6 348 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 LOC102724159A0A0B4J2E5 919 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ERICH4A6NGS2 130 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 GNAI2P04899 355 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 MAP3K10Q02779 954 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 PWP2Q15269 919 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ICE2Q659A1 982 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 KIF1BPQ96EK5 621 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 PAXBP1Q9Y5B6 917 aa13.32□□□□□ -0.28
TRAF3IP2-208ENST00000392556 A0A1B0GUL7 405 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 LACTBP83111 547 aaPredicted RBP13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 SLC9C1Q4G0N8 1177 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ATF7IPQ6VMQ6 1270 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 FASTKD5Q7L8L6 764 aaKnown RBP13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ZNF333Q96JL9 665 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 INPP5BP32019 993 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 RASGRF1Q13972 1273 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 C17orf99Q6UX52 265 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 MIGA2Q7L4E1 593 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ZBTB9Q96C00 473 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 PARK7Q99497 189 aaKnown RBP13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 PICK1Q9NRD5 415 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 PA2G4Q9UQ80 394 aaKnown RBP13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 RFX7Q2KHR2 1363 aa13.31□□□□□ -0.28
TRAF3IP2-208ENST00000392556 COL2A1P02458 1487 aaPredicted RBP13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 NUCB1Q02818 461 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 NFIAQ12857 509 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 SCYL3Q8IZE3 742 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 CHMP4CQ96CF2 233 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 XAGE2Q96GT9 111 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ZDHHC9Q9Y397 364 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 PDE4DIPQ5VU43 2346 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 MROH7-TTC4A0A0A0MT08 1334 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 GPR75-ASB3A0A0A6YYF3 556 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 TBC1D12O60347 775 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 CTNND1O60716 968 aaKnown RBP13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 UQCRFS1P1P0C7P4 283 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 GUCY2CP25092 1073 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 TCP10Q12799 353 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 G3BP1Q13283 466 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 CNPY4Q8N129 248 aa13.3□□□□□ -0.28
TRAF3IP2-208ENST00000392556 CEP120Q8N960 986 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms