RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 FAM214BQ7L5A3 538 aa9.81□□□□□ -0.84
SNORA40.4-201ENST00000390971 ACSF2Q96CM8 615 aaPredicted RBP9.81□□□□□ -0.84
SNORA40.4-201ENST00000390971 MKNK2Q9HBH9 465 aa9.81□□□□□ -0.84
SNORA40.4-201ENST00000390971 DDX41Q9UJV9 622 aaKnown RBP9.81□□□□□ -0.84
SNORA40.4-201ENST00000390971 POLR3KQ9Y2Y1 108 aaPredicted RBP9.81□□□□□ -0.84
SNORA40.4-201ENST00000390971 IGF2BP3O00425 579 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 GRIN3BO60391 1043 aa9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 SLITRK5O94991 958 aa9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 SPINK2P20155 84 aa9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 APOBRQ0VD83 1088 aa9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 MSMPQ1L6U9 139 aa9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 ZNF394Q53GI3 561 aa9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 ARHGAP27Q6ZUM4 889 aa9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 METTL16Q86W50 562 aaKnown RBP9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 ZC3H7BQ9UGR2 993 aaKnown RBP9.8□□□□□ -0.84
SNORA40.4-201ENST00000390971 HTR3BO95264 441 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 EOMESO95936 686 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 MLECQ14165 292 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 LETMD1Q6P1Q0 360 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 ZNF654Q8IZM8 581 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 HEXIM2Q96MH2 286 aaKnown RBP9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 MIPEPQ99797 713 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 BRMS1Q9HCU9 246 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 BSDC1Q9NW68 430 aaPredicted RBP9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 UBP1Q9NZI7 540 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 REV1Q9UBZ9 1251 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 PCDHGB7Q9Y5F8 929 aa9.79□□□□□ -0.84
SNORA40.4-201ENST00000390971 CRKP46108 304 aa9.78□□□□□ -0.84
SNORA40.4-201ENST00000390971 SEZ6Q53EL9 994 aa9.78□□□□□ -0.84
SNORA40.4-201ENST00000390971 ZNF746Q6NUN9 644 aaPredicted RBP9.78□□□□□ -0.84
SNORA40.4-201ENST00000390971 XAGE3Q8WTP9 111 aa9.78□□□□□ -0.84
SNORA40.4-201ENST00000390971 NKD1Q969G9 470 aa9.78□□□□□ -0.84
SNORA40.4-201ENST00000390971 EAF1Q96JC9 268 aaPredicted RBP9.78□□□□□ -0.84
SNORA40.4-201ENST00000390971 PRDM5Q9NQX1 630 aaPredicted RBP9.78□□□□□ -0.84
SNORA40.4-201ENST00000390971 ATE1O95260 518 aa9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 OXCT1P55809 520 aa9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 RACK1P63244 317 aaKnown RBP9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 HDLBPQ00341 1268 aaKnown RBP9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 NBPF11Q86T75 865 aa9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 NT5DC4Q86YG4 428 aa9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 SLITRK4Q8IW52 837 aa9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 FAM181AQ8N9Y4 354 aa9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 FAM13CQ8NE31 585 aa9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 NETO1Q8TDF5 533 aa9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 TPX2Q9ULW0 747 aaKnown RBP9.77□□□□□ -0.85
SNORA40.4-201ENST00000390971 UPK3BL1B0FP48 263 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 UPK3BL2E5RIL1 263 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 WNT11O96014 354 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 CYP7A1P22680 504 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 MCM4P33991 863 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 RBM25P49756 843 aaKnown RBP9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 ZNF165P49910 485 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 ZNF428Q96B54 188 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 DPH2Q9BQC3 489 aaPredicted RBP9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 EHMT1Q9H9B1 1298 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 MAPK8IP1Q9UQF2 711 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 PCDHB14Q9Y5E9 798 aa9.76□□□□□ -0.85
SNORA40.4-201ENST00000390971 GNAT3A8MTJ3 354 aa9.75□□□□□ -0.85
SNORA40.4-201ENST00000390971 PRNPP04156 253 aa9.75□□□□□ -0.85
SNORA40.4-201ENST00000390971 SLFN12Q8IYM2 578 aa9.75□□□□□ -0.85
SNORA40.4-201ENST00000390971 RIN3Q8TB24 985 aa9.75□□□□□ -0.85
SNORA40.4-201ENST00000390971 IFI16Q16666 785 aaKnown RBP9.74□□□□□ -0.85
SNORA40.4-201ENST00000390971 SFRP5Q5T4F7 317 aa9.74□□□□□ -0.85
SNORA40.4-201ENST00000390971 CDH24Q86UP0 819 aa9.74□□□□□ -0.85
SNORA40.4-201ENST00000390971 PLD6Q8N2A8 252 aaKnown RBP9.74□□□□□ -0.85
SNORA40.4-201ENST00000390971 COX4I2Q96KJ9 171 aa9.74□□□□□ -0.85
SNORA40.4-201ENST00000390971 ANGEL1Q9UNK9 670 aaKnown RBP9.74□□□□□ -0.85
SNORA40.4-201ENST00000390971 CEP131Q9UPN4 1083 aa9.74□□□□□ -0.85
SNORA40.4-201ENST00000390971 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.74□□□□□ -0.85
SNORA40.4-201ENST00000390971 TMEM265A0A087WTH1 108 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 CHURC1-FNTBB4DL54 471 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 CEACAM5P06731 702 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 ETV3P41162 512 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 VSIG10LQ86VR7 867 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 STK11IPQ8N1F8 1099 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 CYB5D2Q8WUJ1 264 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 MISP3Q96FF7 219 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 CCDC39Q9UFE4 941 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 KLHL3Q9UH77 587 aa9.73□□□□□ -0.85
SNORA40.4-201ENST00000390971 LOC100996750A0A140TA64 210 aa9.72□□□□□ -0.85
SNORA40.4-201ENST00000390971 CLCQ05315 142 aa9.72□□□□□ -0.85
SNORA40.4-201ENST00000390971 GK5Q6ZS86 529 aa9.72□□□□□ -0.85
SNORA40.4-201ENST00000390971 CCDC74BQ96LY2 380 aa9.72□□□□□ -0.85
SNORA40.4-201ENST00000390971 KRTAP4-6Q9BYQ5 205 aa9.72□□□□□ -0.85
SNORA40.4-201ENST00000390971 SNX11Q9Y5W9 270 aa9.72□□□□□ -0.85
SNORA40.4-201ENST00000390971 U3KQE9 123 aa9.72□□□□□ -0.85
SNORA40.4-201ENST00000390971 SLC22A31A6NKX4 558 aa9.71□□□□□ -0.86
SNORA40.4-201ENST00000390971 ITIH2P19823 946 aa9.71□□□□□ -0.86
SNORA40.4-201ENST00000390971 LRRFIP1Q32MZ4 808 aaKnown RBP9.71□□□□□ -0.86
SNORA40.4-201ENST00000390971 C22orf34Q6ZV56 151 aa9.71□□□□□ -0.86
SNORA40.4-201ENST00000390971 SPATA32Q96LK8 384 aa9.71□□□□□ -0.86
SNORA40.4-201ENST00000390971 GMIPQ9P107 970 aa9.71□□□□□ -0.86
SNORA40.4-201ENST00000390971 VAV3Q9UKW4 847 aa9.71□□□□□ -0.86
SNORA40.4-201ENST00000390971 PLAGL2Q9UPG8 496 aa9.71□□□□□ -0.86
SNORA40.4-201ENST00000390971 DNAJB8Q8NHS0 232 aa9.7□□□□□ -0.86
SNORA40.4-201ENST00000390971 FBXL18Q96ME1 805 aa9.7□□□□□ -0.86
SNORA40.4-201ENST00000390971 TGIF2Q9GZN2 237 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms