RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 C19orf44Q9H6X5 657 aa14.77□□□□□ -0.04
TRAPPC9-201ENST00000389328 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.04
TRAPPC9-201ENST00000389328 M0R2C6 588 aa14.77□□□□□ -0.04
TRAPPC9-201ENST00000389328 GBP2P32456 591 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC9-201ENST00000389328 TTC19Q6DKK2 380 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC9-201ENST00000389328 CCDC91Q7Z6B0 441 aa14.77□□□□□ -0.04
TRAPPC9-201ENST00000389328 SECISBP2LQ93073 1101 aaKnown RBP14.77□□□□□ -0.05
TRAPPC9-201ENST00000389328 TBX22Q9Y458 520 aa14.77□□□□□ -0.05
TRAPPC9-201ENST00000389328 ZMYM6O95789 1325 aa14.77□□□□□ -0.05
TRAPPC9-201ENST00000389328 ADORA1P30542 326 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 PLCD1P51178 756 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 SPATA1Q5VX52 437 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 FAM71BQ8TC56 605 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 BCAS4Q8TDM0 211 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 ABCB6Q9NP58 842 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 TTLL7Q6ZT98 887 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 OR8K1Q8NGG5 319 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 PI16Q6UXB8 463 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 SIRT1Q96EB6 747 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 ORAI2Q96SN7 254 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 MAN1B1Q9UKM7 699 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 MAGEB6P1A0A0J9YX57 407 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 CCT5P48643 541 aa14.76□□□□□ -0.05
TRAPPC9-201ENST00000389328 GNGT1P63211 74 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 APOA5Q6Q788 366 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 CPLX4Q7Z7G2 160 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 RTL9Q8NET4 1388 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 USP6P35125 1406 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 IQGAP1P46940 1657 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 SF3A3Q12874 501 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 ROBO2Q9HCK4 1378 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 TLDC2A0PJX2 215 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 PPP6R2O75170 966 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 GNAT2P19087 354 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 DPF2Q92785 391 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 CCDC51Q96ER9 411 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 MED4Q9NPJ6 270 aa14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 EPN1Q9Y6I3 576 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC9-201ENST00000389328 BICDL2A1A5D9 508 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 SMIM23A6NLE4 172 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 KCNJ18B7U540 433 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 RNF40O75150 1001 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 ATP1A2P50993 1020 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 PDE4DQ08499 809 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 KCNJ12Q14500 433 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 B4GALNT4Q76KP1 1039 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 CALML3P27482 149 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 WDR24Q96S15 920 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 CSRNP2Q9H175 543 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 CASP8Q14790 479 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 TEX13AQ9BXU3 409 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 ST5P78524 1137 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 NR5A1Q13285 461 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 TRIML1Q8N9V2 468 aa14.74□□□□□ -0.05
TRAPPC9-201ENST00000389328 KAT6BQ8WYB5 2073 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 IGKV5-2P06315 115 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 PPFIA1Q13136 1202 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 MORC3Q14149 939 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 ARFGAP2Q8N6H7 521 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 IRX2Q9BZI1 471 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 ARHGEF40Q8TER5 1519 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 CYP2C19P33261 490 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 MAGEA1P43355 309 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 AKNAD1Q5T1N1 836 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 NCAPH2Q6IBW4 605 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 NYAP1Q6ZVC0 841 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 REREQ9P2R6 1566 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 TADA3O75528 432 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 CALM1P0DP23 149 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 CALM2P0DP24 149 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 CALM3P0DP25 149 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 NAPAP54920 295 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 SEPT7Q16181 437 aaKnown RBP14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 E2F4Q16254 413 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 STOX1Q6ZVD7 989 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 SMARCC2Q8TAQ2 1214 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 CRNKL1Q9BZJ0 848 aaKnown RBP14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 CAPN7Q9Y6W3 813 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
TRAPPC9-201ENST00000389328 TYW1BQ6NUM6 668 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 ZNF654Q8IZM8 581 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 PUS7LQ9H0K6 701 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 FAM207AQ9NSI2 230 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 EZRP15311 586 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 MSL1Q68DK7 614 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 ENOX1Q8TC92 643 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 FERMT2Q96AC1 680 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 TSGA10Q9BZW7 698 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 SH3TC1Q8TE82 1336 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 CRB1P82279 1406 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 SYMPKQ92797 1274 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 PPP1R12BO60237 982 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 ZNF76P36508 570 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 LETM2Q2VYF4 491 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 UBLCP1Q8WVY7 318 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 SELENOSQ9BQE4 189 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 HAUS4Q9H6D7 363 aa14.72□□□□□ -0.05
TRAPPC9-201ENST00000389328 SELENOOQ9BVL4 669 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms