RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 GK5Q6ZS86 529 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 MCATQ8IVS2 390 aaKnown RBP5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 TOP6BLQ8N6T0 577 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 EAF1Q96JC9 268 aaPredicted RBP5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 FERD3LQ96RJ6 166 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 CAPN10Q9HC96 672 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 PIM2Q9P1W9 311 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 REV1Q9UBZ9 1251 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 GTF2IRD1Q9UHL9 959 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 PCDHB14Q9Y5E9 798 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 PRR36Q9H6K5 1346 aa5.36□□□□□ -1.55
RNU6-39P-201ENST00000384344 FAM170BA6NMN3 283 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 F13BP05160 661 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 CYP7A1P22680 504 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 CRKP46108 304 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 SLBPQ14493 270 aaKnown RBP eCLIP5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 XP32Q5T750 250 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 PRAMEF13Q5VWM6 474 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 INTS5Q6P9B9 1019 aaKnown RBP5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 ZNF765Q7L2R6 523 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 NPM2Q86SE8 214 aaKnown RBP5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 ZDHHC13Q8IUH4 622 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 SLITRK4Q8IW52 837 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 CRBNQ96SW2 442 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 MIPEPQ99797 713 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 DUSP23Q9BVJ7 150 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 FBRSQ9HAH7 460 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 TJP2Q9UDY2 1190 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 KLHL3Q9UH77 587 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 TPX2Q9ULW0 747 aaKnown RBP5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 RNF112Q9ULX5 631 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 POLR3KQ9Y2Y1 108 aaPredicted RBP5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 CORINQ9Y5Q5 1042 aa5.35□□□□□ -1.55
RNU6-39P-201ENST00000384344 GNAT3A8MTJ3 354 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 CYP26A1O43174 497 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 COBLO75128 1261 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 ATE1O95260 518 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 ADMP35318 185 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 ETV3P41162 512 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 TNNI2P48788 182 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 NKG7Q16617 165 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 FBXW10Q5XX13 1052 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 LETMD1Q6P1Q0 360 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 PHACTR4Q8IZ21 702 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 CYB5D2Q8WUJ1 264 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 ACSF2Q96CM8 615 aaPredicted RBP5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 COX4I2Q96KJ9 171 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 ACBD3Q9H3P7 528 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 EHMT1Q9H9B1 1298 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 LRRC4CQ9HCJ2 640 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 PRDM5Q9NQX1 630 aaPredicted RBP5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 GMIPQ9P107 970 aa5.34□□□□□ -1.55
RNU6-39P-201ENST00000384344 FOSL1P15407 271 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 RAG1P15918 1043 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 GJA8P48165 433 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 RAD51AP2Q09MP3 1159 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 ZMYM1Q5SVZ6 1142 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 UBE3DQ7Z6J8 389 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 SLFN12Q8IYM2 578 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 RASGRP4Q8TDF6 673 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 XAGE3Q8WTP9 111 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 CPLX3Q8WVH0 158 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 GATA6Q92908 595 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 SEC16BQ96JE7 1060 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 PSMG3-AS1Q96PY0 264 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 DPH2Q9BQC3 489 aaPredicted RBP5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 STRIP2Q9ULQ0 834 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 EFR3BQ9Y2G0 817 aa5.33□□□□□ -1.56
RNU6-39P-201ENST00000384344 SCO2A0A1W2PP80 73 aa5.32□□□□□ -1.56
RNU6-39P-201ENST00000384344 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
RNU6-39P-201ENST00000384344 ZC3H6P61129 1189 aaKnown RBP5.32□□□□□ -1.56
RNU6-39P-201ENST00000384344 CLCQ05315 142 aa5.32□□□□□ -1.56
RNU6-39P-201ENST00000384344 CCDC74BQ96LY2 380 aa5.32□□□□□ -1.56
RNU6-39P-201ENST00000384344 MAPK8IP1Q9UQF2 711 aa5.32□□□□□ -1.56
RNU6-39P-201ENST00000384344 IGF2BP3O00425 579 aaKnown RBP eCLIP5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 LEFTY1O75610 366 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 SLITRK5O94991 958 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 TGFB1P01137 390 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 GBP1P32455 592 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 SOX9P48436 509 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 ARSHQ5FYA8 562 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 SFRP5Q5T4F7 317 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 TMEM40Q8WWA1 233 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 MKNK2Q9HBH9 465 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 IGSF5Q9NSI5 407 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 GINM1Q9NU53 330 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 ZNRF3Q9ULT6 936 aa5.31□□□□□ -1.56
RNU6-39P-201ENST00000384344 PRR19A6NJB7 356 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 SLC22A31A6NKX4 558 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 UPK3BL1B0FP48 263 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 FAM155AB1AL88 458 aaPredicted RBP5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 CHURC1-FNTBB4DL54 471 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 UPK3BL2E5RIL1 263 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 KIR3DL1P43629 444 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 EIF6P56537 245 aaKnown RBP5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 RNF4P78317 190 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 OVOS1Q6IE37 1185 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 NLRC3Q7RTR2 1065 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 OR6P1Q8NGX9 317 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 TM9SF2Q99805 663 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms