RNA–Protein interactions for RNA: ENST00000383366.8

NEK11-202, Transcript of NIMA related kinase 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEK11, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-202ENST00000383366 SYNE3Q6ZMZ3 975 aa15.32■□□□□ 0.04
NEK11-202ENST00000383366 CRACR2BQ8N4Y2 399 aaPredicted RBP15.32■□□□□ 0.04
NEK11-202ENST00000383366 COL4A5P29400 1685 aa15.32■□□□□ 0.04
NEK11-202ENST00000383366 WDHD1O75717 1129 aaPredicted RBP15.32■□□□□ 0.04
NEK11-202ENST00000383366 RASA1P20936 1047 aa15.32■□□□□ 0.04
NEK11-202ENST00000383366 ZNF445P59923 1031 aa15.32■□□□□ 0.04
NEK11-202ENST00000383366 SSRP1Q08945 709 aaKnown RBP15.32■□□□□ 0.04
NEK11-202ENST00000383366 IQCA1Q86XH1 822 aa15.32■□□□□ 0.04
NEK11-202ENST00000383366 OXER1Q8TDS5 423 aa15.32■□□□□ 0.04
NEK11-202ENST00000383366 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
NEK11-202ENST00000383366 NR1I2O75469 434 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 PDE4BQ07343 736 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 TCP10Q12799 353 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
NEK11-202ENST00000383366 APOBEC3HQ6NTF7 200 aaKnown RBP15.31■□□□□ 0.04
NEK11-202ENST00000383366 STAG2Q8N3U4 1231 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 TBC1D22AQ8WUA7 517 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 ZSCAN16Q9H4T2 348 aaPredicted RBP15.31■□□□□ 0.04
NEK11-202ENST00000383366 ZNF277Q9NRM2 450 aaPredicted RBP15.31■□□□□ 0.04
NEK11-202ENST00000383366 USP40Q9NVE5 1235 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 MYH6P13533 1939 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 FMNL1O95466 1100 aaPredicted RBP15.31■□□□□ 0.04
NEK11-202ENST00000383366 CDK8P49336 464 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 CDC42EP5Q6NZY7 148 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 SRBD1Q8N5C6 995 aaKnown RBP15.31■□□□□ 0.04
NEK11-202ENST00000383366 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
NEK11-202ENST00000383366 V9GY48 417 aaPredicted RBP15.31■□□□□ 0.04
NEK11-202ENST00000383366 FAM205CA6NFA0 338 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 IFNAR1P17181 557 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 FUT2Q10981 343 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 NR5A1Q13285 461 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 A0A087WWV3 80 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 BTBD18B2RXH4 712 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 GOLGA8HP0CJ92 632 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 RBM5P52756 815 aaKnown RBP eCLIP15.3■□□□□ 0.04
NEK11-202ENST00000383366 EIF6P56537 245 aaKnown RBP15.3■□□□□ 0.04
NEK11-202ENST00000383366 PKN1Q16512 942 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 DACT2Q5SW24 774 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 ERCC4Q92889 916 aaPredicted RBP15.3■□□□□ 0.04
NEK11-202ENST00000383366 FAM163AQ96GL9 167 aaPredicted RBP15.3■□□□□ 0.04
NEK11-202ENST00000383366 DACT1Q9NYF0 836 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 VPS54Q9P1Q0 977 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 DLEC1Q9Y238 1755 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 HMGB2P26583 209 aaKnown RBP15.3■□□□□ 0.04
NEK11-202ENST00000383366 SLC35G1Q2M3R5 365 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 CNKSR1Q969H4 720 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 STX8Q9UNK0 236 aa15.3■□□□□ 0.04
NEK11-202ENST00000383366 SCAF8Q9UPN6 1271 aaKnown RBP15.3■□□□□ 0.04
NEK11-202ENST00000383366 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
NEK11-202ENST00000383366 ZBTB22O15209 634 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 RAD17O75943 681 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 TSPY3P0CV98 308 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 TSPY8P0CW00 308 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 SCAND2PQ9GZW5 306 aaPredicted RBP15.29■□□□□ 0.04
NEK11-202ENST00000383366 PPIP5K2O43314 1243 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 CRKP46108 304 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 EARS2Q5JPH6 523 aaKnown RBP15.29■□□□□ 0.04
NEK11-202ENST00000383366 LRSAM1Q6UWE0 723 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 CATIPQ7Z7H3 387 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 CKAP2LQ8IYA6 745 aa15.29■□□□□ 0.04
NEK11-202ENST00000383366 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
NEK11-202ENST00000383366 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
NEK11-202ENST00000383366 MARCKSP29966 332 aaPredicted RBP15.28■□□□□ 0.04
NEK11-202ENST00000383366 R3HDM1Q15032 1099 aaKnown RBP15.28■□□□□ 0.04
NEK11-202ENST00000383366 MYSM1Q5VVJ2 828 aa15.28■□□□□ 0.04
NEK11-202ENST00000383366 EYA3Q99504 573 aa15.28■□□□□ 0.04
NEK11-202ENST00000383366 KIF3AQ9Y496 699 aa15.28■□□□□ 0.04
NEK11-202ENST00000383366 PODNQ7Z5L7 613 aa15.28■□□□□ 0.04
NEK11-202ENST00000383366 BICD2Q8TD16 824 aa15.28■□□□□ 0.04
NEK11-202ENST00000383366 MRVI1Q9Y6F6 885 aa15.28■□□□□ 0.04
NEK11-202ENST00000383366 QSER1Q2KHR3 1735 aa15.28■□□□□ 0.04
NEK11-202ENST00000383366 FOCADQ5VW36 1801 aa15.28■□□□□ 0.04
NEK11-202ENST00000383366 CDKL5O76039 1030 aa15.27■□□□□ 0.04
NEK11-202ENST00000383366 SLC3A2P08195 630 aaKnown RBP15.27■□□□□ 0.04
NEK11-202ENST00000383366 MRE11P49959 708 aa15.27■□□□□ 0.04
NEK11-202ENST00000383366 ZNF444Q8N0Y2 327 aaPredicted RBP15.27■□□□□ 0.04
NEK11-202ENST00000383366 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
NEK11-202ENST00000383366 TTLL6Q8N841 843 aa15.27■□□□□ 0.04
NEK11-202ENST00000383366 RCOR1Q9UKL0 485 aa15.27■□□□□ 0.04
NEK11-202ENST00000383366 PCDHA7Q9UN72 937 aa15.27■□□□□ 0.04
NEK11-202ENST00000383366 C10orf71Q711Q0 1435 aa15.27■□□□□ 0.04
NEK11-202ENST00000383366 ELP1O95163 1332 aa15.27■□□□□ 0.04
NEK11-202ENST00000383366 ATP2B1P20020 1258 aa15.27■□□□□ 0.03
NEK11-202ENST00000383366 ME1P48163 572 aa15.27■□□□□ 0.03
NEK11-202ENST00000383366 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.27■□□□□ 0.03
NEK11-202ENST00000383366 GOLGA6L4A6NEF3 574 aa15.27■□□□□ 0.03
NEK11-202ENST00000383366 WNT7AO00755 349 aa15.27■□□□□ 0.03
NEK11-202ENST00000383366 CCDC183Q5T5S1 534 aa15.27■□□□□ 0.03
NEK11-202ENST00000383366 CPLX2Q6PUV4 134 aaKnown RBP15.27■□□□□ 0.03
NEK11-202ENST00000383366 C16orf86Q6ZW13 317 aa15.27■□□□□ 0.03
NEK11-202ENST00000383366 PNMA1Q8ND90 353 aa15.27■□□□□ 0.03
NEK11-202ENST00000383366 NID2Q14112 1375 aa15.26■□□□□ 0.03
NEK11-202ENST00000383366 KIAA2012Q0VF49 1180 aa15.26■□□□□ 0.03
NEK11-202ENST00000383366 TEKT1Q969V4 418 aa15.26■□□□□ 0.03
NEK11-202ENST00000383366 CEP95Q96GE4 821 aa15.26■□□□□ 0.03
NEK11-202ENST00000383366 TMEM47Q9BQJ4 181 aa15.26■□□□□ 0.03
NEK11-202ENST00000383366 ROBO3Q96MS0 1386 aa15.26■□□□□ 0.03
NEK11-202ENST00000383366 SHTN1A0MZ66 631 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms