RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 UTP11Q9Y3A2 253 aaKnown RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 ARHGEF10O15013 1369 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 PTPRTO14522 1441 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 MRPS9P82933 396 aaKnown RBP17.87■□□□□ 0.45
COL2A1-202ENST00000380518 NCAPH2Q6IBW4 605 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 INTS8Q75QN2 995 aaKnown RBP17.87■□□□□ 0.45
COL2A1-202ENST00000380518 TMEM63CQ9P1W3 806 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 AGTPBP1Q9UPW5 1226 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 VIMP08670 466 aaKnown RBP17.87■□□□□ 0.45
COL2A1-202ENST00000380518 HPDP32754 393 aaPredicted RBP17.87■□□□□ 0.45
COL2A1-202ENST00000380518 ME3Q16798 604 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 ADALQ6DHV7 355 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 ZNF274Q96GC6 653 aaPredicted RBP17.87■□□□□ 0.45
COL2A1-202ENST00000380518 ORAI2Q96SN7 254 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 CROCCP2Q86T23 111 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 ANAPC4Q9UJX5 808 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 NEURL1BA8MQ27 555 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 NDUFAB1O14561 156 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 ELF2Q15723 593 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 CFAP157Q5JU67 520 aa17.87■□□□□ 0.45
COL2A1-202ENST00000380518 LACTBP83111 547 aaPredicted RBP17.86■□□□□ 0.45
COL2A1-202ENST00000380518 CALCRLQ16602 461 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 NELFBQ8WX92 580 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 FLOT1O75955 427 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 MTX1Q13505 466 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 CABP7Q86V35 215 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 IQCDQ96DY2 449 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 PSMC4P43686 418 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 RNASE9P60153 205 aaKnown RBP17.86■□□□□ 0.45
COL2A1-202ENST00000380518 BEND3Q5T5X7 828 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 C17orf53Q8N3J3 647 aaPredicted RBP17.86■□□□□ 0.45
COL2A1-202ENST00000380518 UBE2Q2Q8WVN8 375 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 FAM204AQ9H8W3 233 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 TSKSQ9UJT2 592 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
COL2A1-202ENST00000380518 SLC8A3P57103 927 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 RUFY4Q6ZNE9 571 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 DYMQ7RTS9 669 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 CCDC110Q8TBZ0 833 aa17.86■□□□□ 0.45
COL2A1-202ENST00000380518 NUCKS1Q9H1E3 243 aaKnown RBP17.86■□□□□ 0.45
COL2A1-202ENST00000380518 GOLGA6CA6NDK9 693 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 GOLGA6DP0CG33 693 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 KLHL30Q0D2K2 578 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 STRN3Q13033 797 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 CLUL1Q15846 466 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 REXO1Q8N1G1 1221 aaKnown RBP17.85■□□□□ 0.45
COL2A1-202ENST00000380518 GOLGA6AQ9NYA3 693 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 TFAP4Q01664 338 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 CTTNBP2NLQ9P2B4 639 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 SWAP70Q9UH65 585 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 TRPC3Q13507 836 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 C10orf67Q8IYJ2 551 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.85■□□□□ 0.454e-6■■■■■ 36.8
COL2A1-202ENST00000380518 PLEKHG3A1L390 1219 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 CEP104O60308 925 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 CA8P35219 290 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 VPS54Q9P1Q0 977 aa17.85■□□□□ 0.45
COL2A1-202ENST00000380518 TCIRG1Q13488 830 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 CCDC51Q96ER9 411 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 SLF1Q9BQI6 1058 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 CFAP43Q8NDM7 1665 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 PPFIBP2Q8ND30 876 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 XPO4Q9C0E2 1151 aaKnown RBP17.84■□□□□ 0.45
COL2A1-202ENST00000380518 PICK1Q9NRD5 415 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 KIAA1468Q9P260 1216 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 EXOC3O60645 756 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 GSPT1P15170 499 aaKnown RBP17.84■□□□□ 0.45
COL2A1-202ENST00000380518 PAK2Q13177 524 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 TBC1D22AQ8WUA7 517 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 WWC3Q9ULE0 1092 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 CTTNBP2Q8WZ74 1663 aa17.84■□□□□ 0.45
COL2A1-202ENST00000380518 UAP1Q16222 522 aaPredicted RBP17.83■□□□□ 0.45
COL2A1-202ENST00000380518 TRMT44Q8IYL2 757 aaKnown RBP17.83■□□□□ 0.45
COL2A1-202ENST00000380518 ZNF654Q8IZM8 581 aa17.83■□□□□ 0.45
COL2A1-202ENST00000380518 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.45
COL2A1-202ENST00000380518 CCDC160A6NGH7 325 aa17.83■□□□□ 0.45
COL2A1-202ENST00000380518 KIFC2Q96AC6 838 aa17.83■□□□□ 0.45
COL2A1-202ENST00000380518 RASSF4Q9H2L5 321 aa17.83■□□□□ 0.45
COL2A1-202ENST00000380518 SERTAD1Q9UHV2 236 aa17.83■□□□□ 0.45
COL2A1-202ENST00000380518 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 DTNBO60941 627 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 CFAP221Q4G0U5 840 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 SYCE1Q8N0S2 351 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 GOLGA6BA6NDN3 693 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 GAS8O95995 478 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 HSPA2P54652 639 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 NBPF14Q5TI25 921 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 MAPKAPK5Q8IW41 473 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 STAMQ92783 540 aa17.83■□□□□ 0.44
COL2A1-202ENST00000380518 EDC3Q96F86 508 aaKnown RBP17.83■□□□□ 0.44
COL2A1-202ENST00000380518 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.44
COL2A1-202ENST00000380518 E7EVH7 732 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 PPARAQ07869 468 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 SFMBT2Q5VUG0 894 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 DPP8Q6V1X1 898 aaPredicted RBP17.82■□□□□ 0.44
COL2A1-202ENST00000380518 SMAP1Q8IYB5 467 aaPredicted RBP17.82■□□□□ 0.44
COL2A1-202ENST00000380518 NT5C3AQ9H0P0 336 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 TMOD4Q9NZQ9 345 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 ARPP21Q9UBL0 812 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms