RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CDK5RAP2Q96SN8 1893 aa28.25■■■□□ 2.11
U2AF1-202ENST00000380276 CYP2B6P20813 491 aa28.25■■■□□ 2.11
U2AF1-202ENST00000380276 CYP7A1P22680 504 aa28.25■■■□□ 2.11
U2AF1-202ENST00000380276 JAG1P78504 1218 aa28.25■■■□□ 2.11
U2AF1-202ENST00000380276 TRIM32Q13049 653 aa28.25■■■□□ 2.11
U2AF1-202ENST00000380276 NECAB2Q7Z6G3 386 aa28.25■■■□□ 2.11
U2AF1-202ENST00000380276 CCAR1Q8IX12 1150 aaKnown RBP28.25■■■□□ 2.11
U2AF1-202ENST00000380276 DIS3LQ8TF46 1054 aaKnown RBP28.25■■■□□ 2.11
U2AF1-202ENST00000380276 CRISPLD2Q9H0B8 497 aa28.25■■■□□ 2.11
U2AF1-202ENST00000380276 HMX1Q9NP08 348 aaPredicted RBP28.25■■■□□ 2.11
U2AF1-202ENST00000380276 MYO5AQ9Y4I1 1855 aaKnown RBP28.24■■■□□ 2.11
U2AF1-202ENST00000380276 USP17L10C9JJH3 530 aa28.24■■■□□ 2.11
U2AF1-202ENST00000380276 PEX10O60683 326 aa28.24■■■□□ 2.11
U2AF1-202ENST00000380276 IDH1O75874 414 aaKnown RBP28.24■■■□□ 2.11
U2AF1-202ENST00000380276 P2RX7Q99572 595 aaKnown RBP28.24■■■□□ 2.11
U2AF1-202ENST00000380276 TLR7Q9NYK1 1049 aaKnown RBP28.24■■■□□ 2.11
U2AF1-202ENST00000380276 MORF4L1Q9UBU8 362 aa28.24■■■□□ 2.11
U2AF1-202ENST00000380276 ZBTB21Q9ULJ3 1066 aa28.24■■■□□ 2.11
U2AF1-202ENST00000380276 TRIOBPQ9H2D6 2365 aa28.24■■■□□ 2.11
U2AF1-202ENST00000380276 FOCADQ5VW36 1801 aa28.23■■■□□ 2.11
U2AF1-202ENST00000380276 C19orf81C9J6K1 198 aa28.23■■■□□ 2.11
U2AF1-202ENST00000380276 HERVK_113P62684 666 aa28.23■■■□□ 2.11
U2AF1-202ENST00000380276 GJD2Q9UKL4 321 aa28.23■■■□□ 2.11
U2AF1-202ENST00000380276 RPTORQ8N122 1335 aa28.22■■■□□ 2.11
U2AF1-202ENST00000380276 USP5P45974 858 aa28.22■■■□□ 2.11
U2AF1-202ENST00000380276 MIGA1Q8NAN2 632 aa28.22■■■□□ 2.11
U2AF1-202ENST00000380276 GPRC5AQ8NFJ5 357 aa28.22■■■□□ 2.11
U2AF1-202ENST00000380276 PAGR1Q9BTK6 254 aa28.22■■■□□ 2.11
U2AF1-202ENST00000380276 CWC22Q9HCG8 908 aaKnown RBP28.22■■■□□ 2.11
U2AF1-202ENST00000380276 DBNLQ9UJU6 430 aaKnown RBP28.22■■■□□ 2.11
U2AF1-202ENST00000380276 HOXA7P31268 230 aaPredicted RBP28.21■■■□□ 2.11
U2AF1-202ENST00000380276 PDE3AQ14432 1141 aa28.21■■■□□ 2.11
U2AF1-202ENST00000380276 C7orf61Q8IZ16 206 aa28.21■■■□□ 2.11
U2AF1-202ENST00000380276 TRIB2Q92519 343 aa28.21■■■□□ 2.11
U2AF1-202ENST00000380276 ZNF512BQ96KM6 892 aaPredicted RBP28.21■■■□□ 2.11
U2AF1-202ENST00000380276 NUDT12Q9BQG2 462 aa28.21■■■□□ 2.11
U2AF1-202ENST00000380276 ZYXQ15942 572 aaKnown RBP28.2■■■□□ 2.1
U2AF1-202ENST00000380276 FEZ1Q99689 392 aa28.2■■■□□ 2.1
U2AF1-202ENST00000380276 TXNRD2Q9NNW7 524 aa28.2■■■□□ 2.1
U2AF1-202ENST00000380276 GINM1Q9NU53 330 aa28.2■■■□□ 2.1
U2AF1-202ENST00000380276 STAP2Q9UGK3 403 aa28.2■■■□□ 2.1
U2AF1-202ENST00000380276 MAGEB6Q8N7X4 407 aa28.19■■■□□ 2.1
U2AF1-202ENST00000380276 ANKLE1Q8NAG6 615 aa28.19■■■□□ 2.1
U2AF1-202ENST00000380276 PRO3102Q9H379 93 aa28.19■■■□□ 2.1
U2AF1-202ENST00000380276 PLXNB2O15031 1838 aa28.18■■■□□ 2.1
U2AF1-202ENST00000380276 GH2P01242 217 aa28.18■■■□□ 2.1
U2AF1-202ENST00000380276 HNRNPUQ00839 825 aaKnown RBP eCLIP28.18■■■□□ 2.1
U2AF1-202ENST00000380276 USP17L2Q6R6M4 530 aa28.18■■■□□ 2.1
U2AF1-202ENST00000380276 METTL16Q86W50 562 aaKnown RBP28.18■■■□□ 2.1
U2AF1-202ENST00000380276 SOCS4Q8WXH5 440 aa28.18■■■□□ 2.1
U2AF1-202ENST00000380276 NDUFB9Q9Y6M9 179 aa28.18■■■□□ 2.1
U2AF1-202ENST00000380276 EAF2Q96CJ1 260 aaPredicted RBP28.17■■■□□ 2.1
U2AF1-202ENST00000380276 NBPF3Q9H094 633 aa28.17■■■□□ 2.1
U2AF1-202ENST00000380276 ZMYND8Q9ULU4 1186 aaPredicted RBP28.17■■■□□ 2.1
U2AF1-202ENST00000380276 NOP58Q9Y2X3 529 aaKnown RBP28.17■■■□□ 2.1
U2AF1-202ENST00000380276 MYH1P12882 1939 aa28.16■■■□□ 2.1
U2AF1-202ENST00000380276 ALPK3Q96L96 1907 aa28.16■■■□□ 2.1
U2AF1-202ENST00000380276 IGSF3O75054 1194 aa28.16■■■□□ 2.1
U2AF1-202ENST00000380276 PRKAR2AP13861 404 aaKnown RBP28.16■■■□□ 2.1
U2AF1-202ENST00000380276 ZKSCAN1P17029 563 aaPredicted RBP28.16■■■□□ 2.1
U2AF1-202ENST00000380276 MAPK4P31152 587 aa28.16■■■□□ 2.1
U2AF1-202ENST00000380276 ERVK-9P63128 1117 aa28.16■■■□□ 2.1
U2AF1-202ENST00000380276 ERVK-24P63145 666 aa28.16■■■□□ 2.1
U2AF1-202ENST00000380276 C11orf49Q9H6J7 331 aa28.16■■■□□ 2.1
U2AF1-202ENST00000380276 RBPJLQ9UBG7 517 aa28.16■■■□□ 2.1
U2AF1-202ENST00000380276 DDX60LQ5H9U9 1706 aaKnown RBP28.15■■■□□ 2.1
U2AF1-202ENST00000380276 RAB3GAP1Q15042 981 aa28.15■■■□□ 2.1
U2AF1-202ENST00000380276 GTF3C2Q8WUA4 911 aaPredicted RBP28.15■■■□□ 2.1
U2AF1-202ENST00000380276 EMILIN3Q9NT22 766 aa28.15■■■□□ 2.1
U2AF1-202ENST00000380276 RLBP1P12271 317 aa28.14■■■□□ 2.1
U2AF1-202ENST00000380276 MAP3K12Q12852 859 aa28.14■■■□□ 2.1
U2AF1-202ENST00000380276 Q3C1V9 767 aa28.14■■■□□ 2.1
U2AF1-202ENST00000380276 WDR78Q5VTH9 848 aa28.14■■■□□ 2.1
U2AF1-202ENST00000380276 PORCNQ9H237 461 aa28.14■■■□□ 2.1
U2AF1-202ENST00000380276 EXOC6BQ9Y2D4 811 aa28.14■■■□□ 2.1
U2AF1-202ENST00000380276 A0A1W2PPC1 479 aa28.13■■■□□ 2.09
U2AF1-202ENST00000380276 RGS2P41220 211 aa28.13■■■□□ 2.09
U2AF1-202ENST00000380276 GPR142Q7Z601 462 aa28.13■■■□□ 2.09
U2AF1-202ENST00000380276 PLEKHH3Q7Z736 793 aa28.13■■■□□ 2.09
U2AF1-202ENST00000380276 AACSQ86V21 672 aa28.13■■■□□ 2.09
U2AF1-202ENST00000380276 CERS3Q8IU89 383 aa28.13■■■□□ 2.09
U2AF1-202ENST00000380276 ANTXR1Q9H6X2 564 aa28.13■■■□□ 2.09
U2AF1-202ENST00000380276 SERPINB13Q9UIV8 391 aa28.13■■■□□ 2.09
U2AF1-202ENST00000380276 SYN1P17600 705 aa28.12■■■□□ 2.09
U2AF1-202ENST00000380276 TTC6Q86TZ1 520 aa28.12■■■□□ 2.09
U2AF1-202ENST00000380276 TRMT44Q8IYL2 757 aaKnown RBP28.12■■■□□ 2.09
U2AF1-202ENST00000380276 PIAS4Q8N2W9 510 aaPredicted RBP28.12■■■□□ 2.09
U2AF1-202ENST00000380276 XRCC5P13010 732 aaKnown RBP28.11■■■□□ 2.09
U2AF1-202ENST00000380276 CERKLQ49MI3 558 aaPredicted RBP28.11■■■□□ 2.09
U2AF1-202ENST00000380276 BCL11AQ9H165 835 aa28.11■■■□□ 2.09
U2AF1-202ENST00000380276 CABP5Q9NP86 173 aa28.11■■■□□ 2.09
U2AF1-202ENST00000380276 OGDHLQ9ULD0 1010 aa28.11■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L15C9J2P7 530 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L13C9JLJ4 530 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L11C9JVI0 530 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L18D6R9N7 530 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L22D6RA61 530 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L17D6RBQ6 530 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L19D6RCP7 530 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L20D6RJB6 530 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms