RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 FIP1L1Q6UN15 594 aaKnown RBP4.04□□□□□ -1.76
PRKD3-202ENST00000379066 PPP1R42Q7Z4L9 355 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 ITPRIPQ8IWB1 547 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 CKAP2LQ8IYA6 745 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 KIRREL3Q8IZU9 778 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 ZCWPW1Q9H0M4 648 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 ABCG4Q9H172 646 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 RRAGCQ9HB90 399 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 SLC5A4Q9NY91 659 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.04□□□□□ -1.76
PRKD3-202ENST00000379066 CTNNA3Q9UI47 895 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 STMND1H3BQB6 276 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 SGTAO43765 313 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 CENPAP49450 140 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 ODR4Q5SWX8 454 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 ARHGAP22Q7Z5H3 698 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 HINFPQ9BQA5 517 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 FANCFQ9NPI8 374 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 MRPL42Q9Y6G3 142 aaKnown RBP4.04□□□□□ -1.76
PRKD3-202ENST00000379066 NPATQ14207 1427 aa4.04□□□□□ -1.76
PRKD3-202ENST00000379066 EIF3CLB5ME19 914 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 IL33O95760 270 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 HOXA10P31260 410 aaPredicted RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SDE2Q6IQ49 451 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 MTHFD1LQ6UB35 978 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 ASIC4Q96FT7 647 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 EIF3CQ99613 913 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 CENPHQ9H3R5 247 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 DCAF16Q9NXF7 216 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 HOOK1Q9UJC3 728 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SPO11Q9Y5K1 396 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 ATP7AQ04656 1500 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SCAF11Q99590 1463 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 M0R2C6 588 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 WASLO00401 505 aaPredicted RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SART1O43290 800 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 CSE1LP55060 971 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 HDAC4P56524 1084 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SYCP1Q15431 976 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 ANKRD13DQ6ZTN6 518 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 TRIM50Q86XT4 487 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 NOC3LQ8WTT2 800 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 APPBP2Q92624 585 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SH3KBP1Q96B97 665 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 MAP3K14Q99558 947 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SYNCQ9H7C4 482 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 TRMT112Q9UI30 125 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 BARX2Q9UMQ3 279 aaPredicted RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 BZW2Q9Y6E2 419 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 NOS1P29475 1434 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 P4HA2O15460 535 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 LPXNO60711 386 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 TMEM127O75204 238 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 MCM5P33992 734 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 FLIIQ13045 1269 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 FBXW10Q5XX13 1052 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 GALNT17Q6IS24 598 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 ZNF280CQ8ND82 737 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 FAM76AQ8TAV0 307 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 DDX11Q96FC9 970 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 PPP1R9BQ96SB3 815 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 MAK16Q9BXY0 300 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 DNAAF2Q9NVR5 837 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 PCDH11XQ9BZA7 1347 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 PCDH11YQ9BZA8 1340 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 STK25O00506 426 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 FOXD2O60548 495 aaPredicted RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 GPSM2P81274 684 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 ICA1Q05084 483 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 RBM20Q5T481 1227 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 BRSK2Q8IWQ3 736 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 CNBD1Q8NA66 436 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SUPT20HQ8NEM7 779 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 DPF3Q92784 378 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 VCPKMTQ9H867 229 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SNX5Q9Y5X3 404 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 SETD1BQ9UPS6 1966 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 DAPK1P53355 1430 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 TARBP1Q13395 1621 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 GOLGA6L10A0A0M3HER8 536 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 VIL1P09327 827 aaKnown RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 KIF5BP33176 963 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 NEK2P51955 445 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 LRP8Q14114 963 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 GKAP1Q5VSY0 366 aaPredicted RBP4.03□□□□□ -1.76
PRKD3-202ENST00000379066 UROC1Q96N76 676 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 FNBP1Q96RU3 617 aa4.03□□□□□ -1.76
PRKD3-202ENST00000379066 KDM5DQ9BY66 1539 aa4.03□□□□□ -1.77
PRKD3-202ENST00000379066 NUP160Q12769 1436 aa4.02□□□□□ -1.77
PRKD3-202ENST00000379066 MADDQ8WXG6 1647 aa4.02□□□□□ -1.77
PRKD3-202ENST00000379066 ACEP12821 1306 aa4.02□□□□□ -1.77
PRKD3-202ENST00000379066 MTRF1O75570 445 aaKnown RBP4.02□□□□□ -1.77
PRKD3-202ENST00000379066 SLC3A2P08195 630 aaKnown RBP4.02□□□□□ -1.77
PRKD3-202ENST00000379066 TNNI2P48788 182 aa4.02□□□□□ -1.77
PRKD3-202ENST00000379066 UBASH3AP57075 661 aa4.02□□□□□ -1.77
PRKD3-202ENST00000379066 ARPC4P59998 168 aa4.02□□□□□ -1.77
PRKD3-202ENST00000379066 CRYMQ14894 314 aa4.02□□□□□ -1.77
PRKD3-202ENST00000379066 TAF11Q15544 211 aa4.02□□□□□ -1.77
PRKD3-202ENST00000379066 LRRFIP1Q32MZ4 808 aaKnown RBP4.02□□□□□ -1.77
PRKD3-202ENST00000379066 CAVIN4Q5BKX8 364 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms