RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SAP30BPQ9UHR5 308 aaKnown RBP21.86■■□□□ 1.09
PDLIM4-202ENST00000379018 PNMA6EA0A0J9YXQ4 647 aa21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 BAG3O95817 575 aa21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 ASNSP08243 561 aa21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 UQCRFS1P1P0C7P4 283 aa21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 ZKSCAN1P17029 563 aaPredicted RBP21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 MTX1Q13505 466 aa21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 GPRC5AQ8NFJ5 357 aa21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 TNNQ9UQP3 1299 aa21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 CDK5RAP2Q96SN8 1893 aa21.85■■□□□ 1.09
PDLIM4-202ENST00000379018 MAST2Q6P0Q8 1798 aa21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 FLT1P17948 1338 aa21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 BMP8BP34820 402 aa21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 SOCS4Q8WXH5 440 aa21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 WDR18Q9BV38 432 aa21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 UBE2OQ9C0C9 1292 aaKnown RBP21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 DHX36Q9H2U1 1008 aaKnown RBP21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 DNAJC18Q9H819 358 aa21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 OGDHLQ9ULD0 1010 aa21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 PALD1Q9ULE6 856 aa21.84■■□□□ 1.09
PDLIM4-202ENST00000379018 USP17L10C9JJH3 530 aa21.83■■□□□ 1.09
PDLIM4-202ENST00000379018 GNAI2P04899 355 aa21.83■■□□□ 1.09
PDLIM4-202ENST00000379018 OS9Q13438 667 aaPredicted RBP21.83■■□□□ 1.09
PDLIM4-202ENST00000379018 ADGRA1Q86SQ6 560 aa21.83■■□□□ 1.09
PDLIM4-202ENST00000379018 FRAT1Q92837 279 aaPredicted RBP21.83■■□□□ 1.09
PDLIM4-202ENST00000379018 CLUAP1Q96AJ1 413 aa21.83■■□□□ 1.09
PDLIM4-202ENST00000379018 MYO5AQ9Y4I1 1855 aaKnown RBP21.83■■□□□ 1.08
PDLIM4-202ENST00000379018 PFASO15067 1338 aa21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 PLCG2P16885 1265 aa21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 CCND3P30281 292 aaPredicted RBP21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 CACNB2Q08289 660 aaPredicted RBP21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 ZYXQ15942 572 aaKnown RBP21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 CCL14Q16627 93 aa21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 TDHQ8IZJ6 230 aa21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 PORCNQ9H237 461 aa21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 ZBTB21Q9ULJ3 1066 aa21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 NDUFB9Q9Y6M9 179 aa21.82■■□□□ 1.08
PDLIM4-202ENST00000379018 MAPK4P31152 587 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 HOXA7P31268 230 aaPredicted RBP21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 ERVK-9P63128 1117 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 ERVK-24P63145 666 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 Q3C1V9 767 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 MAP3K21Q5TCX8 1036 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 WDR78Q5VTH9 848 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 GPR142Q7Z601 462 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 DBNDD2Q9BQY9 259 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 RBPJLQ9UBG7 517 aa21.81■■□□□ 1.08
PDLIM4-202ENST00000379018 C19orf81C9J6K1 198 aa21.8■■□□□ 1.08
PDLIM4-202ENST00000379018 HLA-DOAP06340 250 aa21.8■■□□□ 1.08
PDLIM4-202ENST00000379018 TRIM27P14373 513 aa21.8■■□□□ 1.08
PDLIM4-202ENST00000379018 RGS2P41220 211 aa21.8■■□□□ 1.08
PDLIM4-202ENST00000379018 CCDC158Q5M9N0 1113 aa21.8■■□□□ 1.08
PDLIM4-202ENST00000379018 ARHGAP45Q92619 1136 aa21.8■■□□□ 1.08
PDLIM4-202ENST00000379018 FEZ1Q99689 392 aa21.8■■□□□ 1.08
PDLIM4-202ENST00000379018 FOCADQ5VW36 1801 aa21.8■■□□□ 1.08
PDLIM4-202ENST00000379018 DYNLL1P63167 89 aaKnown RBP21.79■■□□□ 1.08
PDLIM4-202ENST00000379018 MDM2Q00987 491 aaPredicted RBP21.79■■□□□ 1.08
PDLIM4-202ENST00000379018 PLEKHH3Q7Z736 793 aa21.79■■□□□ 1.08
PDLIM4-202ENST00000379018 CYP2E1P05181 493 aaPredicted RBP21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 XRCC5P13010 732 aaKnown RBP21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 LRRC26Q2I0M4 334 aa21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 TNNI3KQ59H18 835 aa21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 USP17L2Q6R6M4 530 aa21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 FOXP4Q8IVH2 680 aaPredicted RBP21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 TRMT44Q8IYL2 757 aaKnown RBP21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 APBA2Q99767 749 aa21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 EMILIN3Q9NT22 766 aa21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 FPGT-TNNI3KV9GXZ4 949 aa21.78■■□□□ 1.08
PDLIM4-202ENST00000379018 A0A0C4DFX4 3053 aa21.77■■□□□ 1.08
PDLIM4-202ENST00000379018 MYH1P12882 1939 aa21.77■■□□□ 1.08
PDLIM4-202ENST00000379018 GH2P01242 217 aa21.77■■□□□ 1.08
PDLIM4-202ENST00000379018 ZAP70P43403 619 aa21.77■■□□□ 1.08
PDLIM4-202ENST00000379018 LRIT3Q3SXY7 679 aa21.77■■□□□ 1.08
PDLIM4-202ENST00000379018 MIGA1Q8NAN2 632 aa21.77■■□□□ 1.08
PDLIM4-202ENST00000379018 PIH1D3Q9NQM4 214 aaKnown RBP21.77■■□□□ 1.08
PDLIM4-202ENST00000379018 IPO8O15397 1037 aaKnown RBP21.76■■□□□ 1.07
PDLIM4-202ENST00000379018 BCAR3O75815 825 aa21.76■■□□□ 1.07
PDLIM4-202ENST00000379018 CYP7A1P22680 504 aa21.76■■□□□ 1.07
PDLIM4-202ENST00000379018 PPP4CP60510 307 aa21.76■■□□□ 1.07
PDLIM4-202ENST00000379018 MORN1Q5T089 497 aa21.76■■□□□ 1.07
PDLIM4-202ENST00000379018 USP5P45974 858 aa21.75■■□□□ 1.07
PDLIM4-202ENST00000379018 RAB3GAP1Q15042 981 aa21.75■■□□□ 1.07
PDLIM4-202ENST00000379018 POTEEQ6S8J3 1075 aa21.75■■□□□ 1.07
PDLIM4-202ENST00000379018 ATF7IPQ6VMQ6 1270 aa21.75■■□□□ 1.07
PDLIM4-202ENST00000379018 GTF3C2Q8WUA4 911 aaPredicted RBP21.75■■□□□ 1.07
PDLIM4-202ENST00000379018 USP6NLQ92738 828 aa21.75■■□□□ 1.07
PDLIM4-202ENST00000379018 C1orf115Q9H7X2 142 aa21.75■■□□□ 1.07
PDLIM4-202ENST00000379018 FRMPD3Q5JV73 1810 aa21.75■■□□□ 1.07
PDLIM4-202ENST00000379018 IDH1O75874 414 aaKnown RBP21.74■■□□□ 1.07
PDLIM4-202ENST00000379018 COL6A1P12109 1028 aa21.74■■□□□ 1.07
PDLIM4-202ENST00000379018 CNGA1P29973 690 aa21.74■■□□□ 1.07
PDLIM4-202ENST00000379018 LHX8Q68G74 356 aa21.74■■□□□ 1.07
PDLIM4-202ENST00000379018 GPR153Q6NV75 609 aa21.74■■□□□ 1.07
PDLIM4-202ENST00000379018 GINM1Q9NU53 330 aa21.74■■□□□ 1.07
PDLIM4-202ENST00000379018 MTMR10Q9NXD2 777 aa21.74■■□□□ 1.07
PDLIM4-202ENST00000379018 SURF6O75683 361 aaKnown RBP21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 ATN1P54259 1190 aaPredicted RBP21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 MAP2K5Q13163 448 aa21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 MFSD14CQ5VZR4 134 aa21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 METTL16Q86W50 562 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms