RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 LZICQ8WZA0 190 aa14.69□□□□□ -0.06
HIPK3-202ENST00000379016 TBC1D7Q9P0N9 293 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 MAGEB6P1A0A0J9YX57 407 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 GNAQP50148 359 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 RASIP1Q5U651 963 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 HACE1Q8IYU2 909 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 NOC4LQ9BVI4 516 aaKnown RBP14.68□□□□□ -0.06
HIPK3-202ENST00000379016 CCNT1O60563 726 aaKnown RBP14.68□□□□□ -0.06
HIPK3-202ENST00000379016 TROVE2P10155 538 aaKnown RBP eCLIP14.68□□□□□ -0.06
HIPK3-202ENST00000379016 TRPA1O75762 1119 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 EAPPQ56P03 285 aaPredicted RBP14.68□□□□□ -0.06
HIPK3-202ENST00000379016 ZNF804AQ7Z570 1209 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 NME8Q8N427 588 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 BTN2A2Q8WVV5 523 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 NLRP7Q8WX94 980 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 TRIM4Q9C037 500 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 MAPK8IP1Q9UQF2 711 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 FBLN1P23142 703 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 CCDC13Q8IYE1 715 aa14.68□□□□□ -0.06
HIPK3-202ENST00000379016 ZNF277Q9NRM2 450 aaPredicted RBP14.68□□□□□ -0.06
HIPK3-202ENST00000379016 FLOT2Q14254 428 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 CFAP61Q8NHU2 1237 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 KCNG4Q8TDN1 519 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 FAN1Q9Y2M0 1017 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 ZNF467Q7Z7K2 595 aaPredicted RBP14.67□□□□□ -0.06
HIPK3-202ENST00000379016 MMS19Q96T76 1030 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 CNPY2Q9Y2B0 182 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 MYCP01106 439 aaPredicted RBP14.67□□□□□ -0.06
HIPK3-202ENST00000379016 ZNF653Q96CK0 615 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 ZFYVE19Q96K21 471 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 ZNF692Q9BU19 519 aaPredicted RBP14.67□□□□□ -0.06
HIPK3-202ENST00000379016 FBXO2Q9UK22 296 aaPredicted RBP14.67□□□□□ -0.06
HIPK3-202ENST00000379016 IWS1Q96ST2 819 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 IPO11Q9UI26 975 aaKnown RBP14.67□□□□□ -0.06
HIPK3-202ENST00000379016 EIF6P56537 245 aaKnown RBP14.67□□□□□ -0.06
HIPK3-202ENST00000379016 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
HIPK3-202ENST00000379016 RTL1A6NKG5 1358 aa14.67□□□□□ -0.06
HIPK3-202ENST00000379016 CALUO43852 315 aaPredicted RBP14.66□□□□□ -0.06
HIPK3-202ENST00000379016 BMP15O95972 392 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 TNPO1Q92973 898 aaKnown RBP14.66□□□□□ -0.06
HIPK3-202ENST00000379016 ZC3H12CQ9C0D7 883 aaKnown RBP14.66□□□□□ -0.06
HIPK3-202ENST00000379016 MCM9Q9NXL9 1143 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 PPP2R3AQ06190 1150 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 RPAP2Q8IXW5 612 aaPredicted RBP14.66□□□□□ -0.06
HIPK3-202ENST00000379016 KLHDC4Q8TBB5 520 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 PIP4K2CQ8TBX8 421 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 CTTNBP2NLQ9P2B4 639 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
HIPK3-202ENST00000379016 DNM2P50570 870 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 PRIMPOLQ96LW4 560 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 BRD2P25440 801 aaKnown RBP14.66□□□□□ -0.06
HIPK3-202ENST00000379016 NONOQ15233 471 aaKnown RBP eCLIP14.66□□□□□ -0.06
HIPK3-202ENST00000379016 TRIM60Q495X7 471 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 SV2BQ7L1I2 683 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 NME9Q86XW9 330 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 VPS16Q9H269 839 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 LETM2Q2VYF4 491 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 ABHD8Q96I13 439 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 RXRAP19793 462 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 SMAP1Q8IYB5 467 aaPredicted RBP14.66□□□□□ -0.06
HIPK3-202ENST00000379016 HOOK2Q96ED9 719 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 CABS1Q96KC9 395 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 IFNKQ9P0W0 207 aa14.66□□□□□ -0.06
HIPK3-202ENST00000379016 IFNB1P01574 187 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 OTULINQ96BN8 352 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 AZI2Q9H6S1 392 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 SPATS2LQ9NUQ6 558 aaKnown RBP14.65□□□□□ -0.06
HIPK3-202ENST00000379016 IFT122Q9HBG6 1241 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 NOLC1Q14978 699 aaKnown RBP eCLIP14.65□□□□□ -0.06
HIPK3-202ENST00000379016 ZSCAN23Q3MJ62 389 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 LONRF3Q496Y0 759 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 KAZNQ674X7 775 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 ZNF654Q8IZM8 581 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 PRPF38AQ8NAV1 312 aaKnown RBP14.65□□□□□ -0.06
HIPK3-202ENST00000379016 STX2P32856 288 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 ATP6V1AP38606 617 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 IFNLR1Q8IU57 520 aaPredicted RBP14.65□□□□□ -0.06
HIPK3-202ENST00000379016 IFT20Q8IY31 132 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 STAG1Q8WVM7 1258 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 RPGRIP1Q96KN7 1286 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 VWA3AA6NCI4 1184 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 TRIM75PA6NK02 468 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 PPFIA4O75335 1185 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 Q6ZUG5 572 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 PAGR1Q9BTK6 254 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 RIPOR2Q9Y4F9 1068 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 ARHGEF35A5YM69 484 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 COG4Q9H9E3 785 aa14.65□□□□□ -0.06
HIPK3-202ENST00000379016 HEXIM1O94992 359 aaKnown RBP14.64□□□□□ -0.07
HIPK3-202ENST00000379016 LRMPQ12912 555 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 TSC22D1Q15714 1073 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 MIGA1Q8NAN2 632 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 SCOCQ9UIL1 159 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 TNNI1P19237 187 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 TMTC2Q8N394 836 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 PAWRQ96IZ0 340 aaKnown RBP14.64□□□□□ -0.07
HIPK3-202ENST00000379016 GOLGA8CPA6NN73 597 aa14.64□□□□□ -0.07
HIPK3-202ENST00000379016 CEP104O60308 925 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms