RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 NID2Q14112 1375 aa22.55■■□□□ 1.2
SSU72-204ENST00000378726 IFNAR1P17181 557 aa22.54■■□□□ 1.2
SSU72-204ENST00000378726 PLCD1P51178 756 aa22.54■■□□□ 1.2
SSU72-204ENST00000378726 SSRP1Q08945 709 aaKnown RBP22.54■■□□□ 1.2
SSU72-204ENST00000378726 AIFM3Q96NN9 605 aa22.54■■□□□ 1.2
SSU72-204ENST00000378726 DAGLAQ9Y4D2 1042 aa22.54■■□□□ 1.2
SSU72-204ENST00000378726 TSPY2A6NKD2 308 aa22.54■■□□□ 1.2
SSU72-204ENST00000378726 SLC26A6Q9BXS9 759 aa22.54■■□□□ 1.2
SSU72-204ENST00000378726 MKNK2Q9HBH9 465 aa22.54■■□□□ 1.2
SSU72-204ENST00000378726 KCNQ5Q9NR82 932 aa22.54■■□□□ 1.2
SSU72-204ENST00000378726 UVSSAQ2YD98 709 aa22.53■■□□□ 1.2
SSU72-204ENST00000378726 SLX4Q8IY92 1834 aa22.53■■□□□ 1.2
SSU72-204ENST00000378726 NMT2O60551 498 aa22.53■■□□□ 1.2
SSU72-204ENST00000378726 FMNL1O95466 1100 aaPredicted RBP22.53■■□□□ 1.2
SSU72-204ENST00000378726 CATIPQ7Z7H3 387 aa22.53■■□□□ 1.2
SSU72-204ENST00000378726 RGS22Q8NE09 1264 aa22.53■■□□□ 1.2
SSU72-204ENST00000378726 USP25Q9UHP3 1055 aa22.53■■□□□ 1.2
SSU72-204ENST00000378726 QSER1Q2KHR3 1735 aa22.52■■□□□ 1.2
SSU72-204ENST00000378726 TFAP4Q01664 338 aa22.52■■□□□ 1.2
SSU72-204ENST00000378726 PPP2R5BQ15173 497 aa22.52■■□□□ 1.2
SSU72-204ENST00000378726 ILDR1Q86SU0 546 aaPredicted RBP22.52■■□□□ 1.2
SSU72-204ENST00000378726 CCDC82Q8N4S0 544 aa22.52■■□□□ 1.2
SSU72-204ENST00000378726 SLC16A10Q8TF71 515 aa22.52■■□□□ 1.2
SSU72-204ENST00000378726 TAOK2Q9UL54 1235 aa22.52■■□□□ 1.2
SSU72-204ENST00000378726 CEBPZQ03701 1054 aaKnown RBP22.51■■□□□ 1.19
SSU72-204ENST00000378726 CMTR1Q8N1G2 835 aaKnown RBP22.51■■□□□ 1.19
SSU72-204ENST00000378726 ZNF396Q96N95 335 aaPredicted RBP22.51■■□□□ 1.19
SSU72-204ENST00000378726 FAM13BQ9NYF5 915 aa22.51■■□□□ 1.19
SSU72-204ENST00000378726 ATL3Q6DD88 541 aa22.51■■□□□ 1.19
SSU72-204ENST00000378726 CRACR2BQ8N4Y2 399 aaPredicted RBP22.51■■□□□ 1.19
SSU72-204ENST00000378726 FLT1P17948 1338 aa22.51■■□□□ 1.19
SSU72-204ENST00000378726 GOLGA6L4A6NEF3 574 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 UBE2Q2LH0YL09 131 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 NT5C2P49902 561 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 SCNN1DP51172 638 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 CC2D2BQ6DHV5 1058 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 TRIM22Q8IYM9 498 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 ZNF444Q8N0Y2 327 aaPredicted RBP22.5■■□□□ 1.19
SSU72-204ENST00000378726 ZNF830Q96NB3 372 aaPredicted RBP22.5■■□□□ 1.19
SSU72-204ENST00000378726 STK36Q9NRP7 1315 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 C21orf2O43822 256 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 KIAA2012Q0VF49 1180 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 TROAPQ12815 778 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 KRT40Q6A162 431 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 NBPF11Q86T75 865 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 WASF1Q92558 559 aa22.5■■□□□ 1.19
SSU72-204ENST00000378726 ROBO3Q96MS0 1386 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 ECE2O60344 883 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 SASS6Q6UVJ0 657 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 USP28Q96RU2 1077 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 RCOR1Q9UKL0 485 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 CALM1P0DP23 149 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 CALM2P0DP24 149 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 CALM3P0DP25 149 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 STRIP1Q5VSL9 837 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 SLC44A5Q8NCS7 719 aa22.49■■□□□ 1.19
SSU72-204ENST00000378726 FTOQ9C0B1 505 aaKnown RBP eCLIP22.49■■□□□ 1.19
SSU72-204ENST00000378726 LETM1O95202 739 aaPredicted RBP22.48■■□□□ 1.19
SSU72-204ENST00000378726 ADCY5O95622 1261 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 GUCY1A2P33402 732 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 KIF23Q02241 960 aaPredicted RBP22.48■■□□□ 1.19
SSU72-204ENST00000378726 TRIM29Q14134 588 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 AOC3Q16853 763 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 BRAPQ7Z569 592 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 TTLL6Q8N841 843 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 ZNF287Q9HBT7 754 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 IL17RBQ9NRM6 502 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 LAMB1P07942 1786 aa22.48■■□□□ 1.19
SSU72-204ENST00000378726 HHIPL2Q6UWX4 724 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 PGBD1Q96JS3 809 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 USP40Q9NVE5 1235 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 GOLGB1Q14789 3259 aaKnown RBP22.47■■□□□ 1.19
SSU72-204ENST00000378726 KIF28PB7ZC32 967 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 DDAH1O94760 285 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 TSPY3P0CV98 308 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 TSPY8P0CW00 308 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 RCSD1Q6JBY9 416 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 SUPT20HQ8NEM7 779 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 TEKT1Q969V4 418 aa22.47■■□□□ 1.19
SSU72-204ENST00000378726 DEXIO95424 95 aa22.46■■□□□ 1.19
SSU72-204ENST00000378726 CDK8P49336 464 aa22.46■■□□□ 1.19
SSU72-204ENST00000378726 DGKHQ86XP1 1220 aa22.46■■□□□ 1.19
SSU72-204ENST00000378726 RBM28Q9NW13 759 aaKnown RBP22.46■■□□□ 1.19
SSU72-204ENST00000378726 PICALMQ13492 652 aa22.46■■□□□ 1.19
SSU72-204ENST00000378726 C16orf86Q6ZW13 317 aa22.46■■□□□ 1.19
SSU72-204ENST00000378726 C10orf71Q711Q0 1435 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 USP17L3A6NCW0 530 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 USP17L4A6NCW7 530 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 RASA1P20936 1047 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 DACT2Q5SW24 774 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 USP17L1Q7RTZ2 530 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 KIAA0825Q8IV33 1275 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 FUCA2Q9BTY2 467 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 TCP11L1Q9NUJ3 509 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 DPEP1P16444 411 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 FKBP1AP62942 108 aaKnown RBP22.45■■□□□ 1.18
SSU72-204ENST00000378726 AKAP17AQ02040 695 aaKnown RBP22.45■■□□□ 1.18
SSU72-204ENST00000378726 CCDC178Q5BJE1 867 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 MYSM1Q5VVJ2 828 aa22.45■■□□□ 1.18
SSU72-204ENST00000378726 APOBEC3HQ6NTF7 200 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms