RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 BAZ2AQ9UIF9 1905 aaKnown RBP22.33■■□□□ 1.17
SSU72-203ENST00000378725 PPIL2Q13356 520 aa22.33■■□□□ 1.17
SSU72-203ENST00000378725 GTF3C3Q9Y5Q9 886 aa22.33■■□□□ 1.17
SSU72-203ENST00000378725 ASNSP08243 561 aa22.32■■□□□ 1.16
SSU72-203ENST00000378725 KIF23Q02241 960 aaPredicted RBP22.32■■□□□ 1.16
SSU72-203ENST00000378725 REM2Q8IYK8 340 aaPredicted RBP22.32■■□□□ 1.16
SSU72-203ENST00000378725 OTUD5Q96G74 571 aa22.32■■□□□ 1.16
SSU72-203ENST00000378725 CCDC17Q96LX7 622 aa22.32■■□□□ 1.16
SSU72-203ENST00000378725 ZHX2Q9Y6X8 837 aa22.32■■□□□ 1.16
SSU72-203ENST00000378725 GDF11O95390 407 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 SLC3A2P08195 630 aaKnown RBP22.31■■□□□ 1.16
SSU72-203ENST00000378725 MKRN3Q13064 507 aaKnown RBP22.31■■□□□ 1.16
SSU72-203ENST00000378725 ABCB5Q2M3G0 1257 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 SHROOM1Q2M3G4 852 aaPredicted RBP22.31■■□□□ 1.16
SSU72-203ENST00000378725 CASC1Q6TDU7 716 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 MS4A4AQ96JQ5 239 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 TBC1D2Q9BYX2 928 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 ZNF287Q9HBT7 754 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 CTNNA3Q9UI47 895 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 ZBTB21Q9ULJ3 1066 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 KCNH4Q9UQ05 1017 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 AFG3L2Q9Y4W6 797 aa22.31■■□□□ 1.16
SSU72-203ENST00000378725 USP17L5A8MUK1 530 aa22.3■■□□□ 1.16
SSU72-203ENST00000378725 IRF6O14896 467 aa22.3■■□□□ 1.16
SSU72-203ENST00000378725 GH2P01242 217 aa22.3■■□□□ 1.16
SSU72-203ENST00000378725 FGRP09769 529 aa22.3■■□□□ 1.16
SSU72-203ENST00000378725 TM4SF4P48230 202 aa22.3■■□□□ 1.16
SSU72-203ENST00000378725 PTH1RQ03431 593 aa22.3■■□□□ 1.16
SSU72-203ENST00000378725 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.3■■□□□ 1.16
SSU72-203ENST00000378725 TESPA1A2RU30 521 aaPredicted RBP22.29■■□□□ 1.16
SSU72-203ENST00000378725 MANSC4A6NHS7 340 aaPredicted RBP22.29■■□□□ 1.16
SSU72-203ENST00000378725 CXCL11O14625 94 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 RASA1P20936 1047 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 GUCY1A2P33402 732 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 GTF2A2P52657 109 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 INHBEP58166 350 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 PDE4BQ07343 736 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 MAP4K1Q92918 833 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 WDR18Q9BV38 432 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 MKNK2Q9HBH9 465 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 CABP5Q9NP86 173 aa22.29■■□□□ 1.16
SSU72-203ENST00000378725 THSD7BQ9C0I4 1608 aa22.28■■□□□ 1.16
SSU72-203ENST00000378725 AKR1B1P15121 316 aa22.28■■□□□ 1.16
SSU72-203ENST00000378725 CTDSPL2Q05D32 466 aa22.28■■□□□ 1.16
SSU72-203ENST00000378725 STK11IPQ8N1F8 1099 aa22.28■■□□□ 1.16
SSU72-203ENST00000378725 LSG1Q9H089 658 aaKnown RBP22.28■■□□□ 1.16
SSU72-203ENST00000378725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.28■■□□□ 1.16
SSU72-203ENST00000378725 TACC3Q9Y6A5 838 aa22.28■■□□□ 1.16
SSU72-203ENST00000378725 ZNF213O14771 459 aa22.27■■□□□ 1.16
SSU72-203ENST00000378725 SNAPC2Q13487 334 aa22.27■■□□□ 1.16
SSU72-203ENST00000378725 DOCK1Q14185 1865 aa22.27■■□□□ 1.16
SSU72-203ENST00000378725 KIAA1211Q6ZU35 1233 aa22.27■■□□□ 1.16
SSU72-203ENST00000378725 TMEM179Q6ZVK1 233 aa22.27■■□□□ 1.16
SSU72-203ENST00000378725 CCDC84Q86UT8 332 aaPredicted RBP22.27■■□□□ 1.16
SSU72-203ENST00000378725 ZNF444Q8N0Y2 327 aaPredicted RBP22.27■■□□□ 1.16
SSU72-203ENST00000378725 ZNF280CQ8ND82 737 aa22.27■■□□□ 1.16
SSU72-203ENST00000378725 NBPF3Q9H094 633 aa22.27■■□□□ 1.16
SSU72-203ENST00000378725 AS3MTQ9HBK9 375 aa22.27■■□□□ 1.16
SSU72-203ENST00000378725 U3KPZ7 1027 aaPredicted RBP22.27■■□□□ 1.16
SSU72-203ENST00000378725 MAP2K1Q02750 393 aaPredicted RBP22.26■■□□□ 1.15
SSU72-203ENST00000378725 SREBF2Q12772 1141 aa22.26■■□□□ 1.15
SSU72-203ENST00000378725 IMMTQ16891 758 aaKnown RBP22.26■■□□□ 1.15
SSU72-203ENST00000378725 INCENPQ9NQS7 918 aa22.26■■□□□ 1.15
SSU72-203ENST00000378725 LAMB1P07942 1786 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 MPHOSPH10O00566 681 aaKnown RBP22.25■■□□□ 1.15
SSU72-203ENST00000378725 ORC4O43929 436 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 PRDM1O75626 825 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 PCP11498 1178 aaKnown RBP22.25■■□□□ 1.15
SSU72-203ENST00000378725 CETPP11597 493 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 HAND2P61296 217 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 SPP2Q13103 211 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 SEPT2Q15019 361 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 RAB3GAP1Q15042 981 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 STAG1Q8WVM7 1258 aa22.25■■□□□ 1.15
SSU72-203ENST00000378725 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.25■■□□□ 1.15
SSU72-203ENST00000378725 A0A0G2JLL6 359 aaPredicted RBP22.24■■□□□ 1.15
SSU72-203ENST00000378725 AKNAD1Q5T1N1 836 aa22.24■■□□□ 1.15
SSU72-203ENST00000378725 PRRT2Q7Z6L0 340 aaPredicted RBP22.24■■□□□ 1.15
SSU72-203ENST00000378725 BRI3BPQ8WY22 251 aa22.24■■□□□ 1.15
SSU72-203ENST00000378725 PTPN18Q99952 460 aa22.24■■□□□ 1.15
SSU72-203ENST00000378725 WBP1LQ9NX94 342 aa22.24■■□□□ 1.15
SSU72-203ENST00000378725 TRIM75PA6NK02 468 aa22.23■■□□□ 1.15
SSU72-203ENST00000378725 MOGSQ13724 837 aa22.23■■□□□ 1.15
SSU72-203ENST00000378725 SH3D19Q5HYK7 790 aa22.23■■□□□ 1.15
SSU72-203ENST00000378725 SIAH1Q8IUQ4 282 aa22.23■■□□□ 1.15
SSU72-203ENST00000378725 TBC1D10CQ8IV04 446 aa22.23■■□□□ 1.15
SSU72-203ENST00000378725 RNF41Q9H4P4 317 aaPredicted RBP22.23■■□□□ 1.15
SSU72-203ENST00000378725 CCL15-CCL14A0A0B4J2E2 113 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 IGKV6D-41A0A0C4DH26 115 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 C19orf81C9J6K1 198 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 BACE1P56817 501 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 CCL15Q16663 113 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 MFSD6Q6ZSS7 791 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 IFNL1Q8IU54 200 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 NEDD1Q8NHV4 660 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 KANSL2Q9H9L4 492 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 ANO2Q9NQ90 1003 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 RBM8AQ9Y5S9 174 aaKnown RBP22.22■■□□□ 1.15
SSU72-203ENST00000378725 PHIPQ8WWQ0 1821 aa22.22■■□□□ 1.15
SSU72-203ENST00000378725 USP17L10C9JJH3 530 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms