RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.51
ARHGEF39-201ENST00000378387 IRAK4Q9NWZ3 460 aa11.83□□□□□ -0.51
ARHGEF39-201ENST00000378387 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 ABCC1P33527 1531 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 GOLGA8KD6RF30 607 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 CYP27A1Q02318 531 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 MAP2K1Q02750 393 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 HIBCHQ6NVY1 386 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 IL17RAQ96F46 866 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 CHP1Q99653 195 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 CCDC113Q9H0I3 377 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 RBM28Q9NW13 759 aaKnown RBP11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 KCNJ14Q9UNX9 436 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 ANKRD18BA2A2Z9 1011 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 GCFC2P16383 781 aaKnown RBP11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 SSR1P43307 286 aaKnown RBP11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 APBA1Q02410 837 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 TMEM139Q8IV31 216 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 YIPF3Q9GZM5 350 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 KNDC1Q76NI1 1749 aa11.83□□□□□ -0.52
ARHGEF39-201ENST00000378387 MYO1BO43795 1136 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 MFAP3LO75121 409 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 ERCC3P19447 782 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 MYO1EQ12965 1108 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 C8orf74Q6P047 294 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 FOXP4Q8IVH2 680 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 BLZF1Q9H2G9 400 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 KIF9Q9HAQ2 790 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 HAUS2Q9NVX0 235 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 AATKQ6ZMQ8 1374 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 ESYT3A0FGR9 886 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 GOLGA8AA7E2F4 631 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 CDKL5O76039 1030 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 FDPSP14324 419 aaKnown RBP11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 C1orf141Q5JVX7 400 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 MEX3CQ5U5Q3 659 aaKnown RBP11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 PANX2Q96RD6 677 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 A0A0G2JS52 829 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 CPP00450 1065 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 MYBL1P10243 752 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 MYBL2P10244 700 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 EGFL6Q8IUX8 553 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 ZBTB10Q96DT7 871 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 LGR6Q9HBX8 967 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 SMARCAL1Q9NZC9 954 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 DBNLQ9UJU6 430 aaKnown RBP11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 NPATQ14207 1427 aa11.82□□□□□ -0.52
ARHGEF39-201ENST00000378387 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 SGSM3Q96HU1 749 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 SLC40A1Q9NP59 571 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 FAM184BQ9ULE4 1060 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 ERCC6L2Q5T890 1561 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 SMIM23A6NLE4 172 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 TRIM22Q8IYM9 498 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 CMTR1Q8N1G2 835 aaKnown RBP11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 ARMC2Q8NEN0 867 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 NCOA7Q8NI08 942 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 ENOX1Q8TC92 643 aaKnown RBP11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 ANKRD24Q8TF21 1146 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 ZNF274Q96GC6 653 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 PAG1Q9NWQ8 432 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 BTBD18B2RXH4 712 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 AKR1B10O60218 316 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 EZH2Q15910 746 aaKnown RBP11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 NBPF14Q5TI25 921 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 PARP9Q8IXQ6 854 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 CCDC13Q8IYE1 715 aa11.81□□□□□ -0.52
ARHGEF39-201ENST00000378387 USO1O60763 962 aaKnown RBP11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 HSPD1P10809 573 aaKnown RBP11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 CYLC1P35663 651 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 CCNI2Q6ZMN8 369 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 KCNB2Q92953 911 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 TULP4Q9NRJ4 1543 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 NDUFA10O95299 355 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 KRT83P78385 493 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 HDLBPQ00341 1268 aaKnown RBP11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 IFFO1Q0D2I5 559 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 CCDC42Q96M95 316 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 LRRC1Q9BTT6 524 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 VIPAS39Q9H9C1 493 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 FANCAO15360 1455 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 ACEP12821 1306 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 TNNI3KQ59H18 835 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 TRIM68Q6AZZ1 485 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 EHBP1Q8NDI1 1231 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 HSD3B7Q9H2F3 369 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 CABP5Q9NP86 173 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 TUBE1Q9UJT0 475 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 FPGT-TNNI3KV9GXZ4 949 aa11.8□□□□□ -0.52
ARHGEF39-201ENST00000378387 TACC1O75410 805 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms