RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 SNCAIPQ9Y6H5 919 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 ZMYM6O95789 1325 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 SLC10A3P09131 477 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 SHMT1P34896 483 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 HAND2P61296 217 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 PPATQ06203 517 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 GABPAQ06546 454 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 TATDN1Q6P1N9 297 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 IL25Q9H293 177 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 AS3MTQ9HBK9 375 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 GINM1Q9NU53 330 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 ZHX2Q9Y6X8 837 aa18.09■□□□□ 0.49
PFDN6-202ENST00000374607 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
PFDN6-202ENST00000374607 FOXP2O15409 715 aa18.08■□□□□ 0.48
PFDN6-202ENST00000374607 AOC2O75106 756 aa18.08■□□□□ 0.48
PFDN6-202ENST00000374607 GH2P01242 217 aa18.08■□□□□ 0.48
PFDN6-202ENST00000374607 ZBTB48P10074 688 aaPredicted RBP18.08■□□□□ 0.48
PFDN6-202ENST00000374607 RRP12Q5JTH9 1297 aaKnown RBP18.08■□□□□ 0.48
PFDN6-202ENST00000374607 SPRYD7Q5W111 196 aa18.08■□□□□ 0.48
PFDN6-202ENST00000374607 CCDC17Q96LX7 622 aa18.08■□□□□ 0.48
PFDN6-202ENST00000374607 RNF41Q9H4P4 317 aaPredicted RBP18.08■□□□□ 0.48
PFDN6-202ENST00000374607 LAMB1P07942 1786 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 SPDYE5A6NIY4 337 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 USP17L5A8MUK1 530 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 PRDM1O75626 825 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 PTPRAP18433 802 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 PTH1RQ03431 593 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 MFSD6Q6ZSS7 791 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 TBC1D2Q9BYX2 928 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 ZBTB21Q9ULJ3 1066 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 OTOFQ9HC10 1997 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 SIPA1L1O43166 1804 aa18.07■□□□□ 0.48
PFDN6-202ENST00000374607 SMIM22K7EJ46 135 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 REC8O95072 547 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 TSPY3P0CV98 308 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 TSPY8P0CW00 308 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 MAP2K2P36507 400 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 GTF2A2P52657 109 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 SREBF2Q12772 1141 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 PPIL2Q13356 520 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 TMEM179Q6ZVK1 233 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 BEGAINQ9BUH8 593 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 ANAPC4Q9UJX5 808 aa18.06■□□□□ 0.48
PFDN6-202ENST00000374607 ROBO3Q96MS0 1386 aa18.05■□□□□ 0.48
PFDN6-202ENST00000374607 MANSC4A6NHS7 340 aaPredicted RBP18.05■□□□□ 0.48
PFDN6-202ENST00000374607 TRIM75PA6NK02 468 aa18.05■□□□□ 0.48
PFDN6-202ENST00000374607 TSPY2A6NKD2 308 aa18.05■□□□□ 0.48
PFDN6-202ENST00000374607 FAM155AB1AL88 458 aaPredicted RBP18.05■□□□□ 0.48
PFDN6-202ENST00000374607 RANBP6O60518 1105 aaKnown RBP18.05■□□□□ 0.48
PFDN6-202ENST00000374607 EIF5BO60841 1220 aaKnown RBP18.05■□□□□ 0.48
PFDN6-202ENST00000374607 ATP2B2Q01814 1243 aa18.05■□□□□ 0.48
PFDN6-202ENST00000374607 KIF23Q02241 960 aaPredicted RBP18.05■□□□□ 0.48
PFDN6-202ENST00000374607 SNAPC2Q13487 334 aa18.05■□□□□ 0.48
PFDN6-202ENST00000374607 RRP1BQ14684 758 aaKnown RBP18.05■□□□□ 0.48
PFDN6-202ENST00000374607 REM2Q8IYK8 340 aaPredicted RBP18.05■□□□□ 0.48
PFDN6-202ENST00000374607 FEZ1Q99689 392 aa18.05■□□□□ 0.48
PFDN6-202ENST00000374607 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.05■□□□□ 0.48
PFDN6-202ENST00000374607 DOCK1Q14185 1865 aa18.05■□□□□ 0.48
PFDN6-202ENST00000374607 MYH8P13535 1937 aa18.04■□□□□ 0.48
PFDN6-202ENST00000374607 IRF6O14896 467 aa18.04■□□□□ 0.48
PFDN6-202ENST00000374607 HSPA1AP0DMV8 641 aaKnown RBP18.04■□□□□ 0.48
PFDN6-202ENST00000374607 HSPA1BP0DMV9 641 aaKnown RBP18.04■□□□□ 0.48
PFDN6-202ENST00000374607 AKR1B1P15121 316 aa18.04■□□□□ 0.48
PFDN6-202ENST00000374607 TRDNQ13061 729 aa18.04■□□□□ 0.48
PFDN6-202ENST00000374607 AKNAD1Q5T1N1 836 aa18.04■□□□□ 0.48
PFDN6-202ENST00000374607 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
PFDN6-202ENST00000374607 CCDC84Q86UT8 332 aaPredicted RBP18.04■□□□□ 0.48
PFDN6-202ENST00000374607 ZNF280CQ8ND82 737 aa18.04■□□□□ 0.48
PFDN6-202ENST00000374607 MAP4K1Q92918 833 aa18.04■□□□□ 0.48
PFDN6-202ENST00000374607 RBM8AQ9Y5S9 174 aaKnown RBP18.04■□□□□ 0.48
PFDN6-202ENST00000374607 ATAD5Q96QE3 1844 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
PFDN6-202ENST00000374607 CETPP11597 493 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 RASA1P20936 1047 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 GJA5P36382 358 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 INHBEP58166 350 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 TFAP4Q01664 338 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 SPP2Q13103 211 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 SEPT2Q15019 361 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 FAM47AQ5JRC9 791 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 OTUD7BQ6GQQ9 843 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 LSG1Q9H089 658 aaKnown RBP18.03■□□□□ 0.48
PFDN6-202ENST00000374607 ARHGEF10LQ9HCE6 1279 aa18.03■□□□□ 0.48
PFDN6-202ENST00000374607 PCNTO95613 3336 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 CCL15-CCL14A0A0B4J2E2 113 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 CXCL11O14625 94 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 MAP2K1Q02750 393 aaPredicted RBP18.02■□□□□ 0.48
PFDN6-202ENST00000374607 ICA1Q05084 483 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 CCL15Q16663 113 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 SHROOM1Q2M3G4 852 aaPredicted RBP18.02■□□□□ 0.48
PFDN6-202ENST00000374607 GADL1Q6ZQY3 521 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 STAG1Q8WVM7 1258 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 ESR2Q92731 530 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 CNNM2Q9H8M5 875 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 KANSL2Q9H9L4 492 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 INCENPQ9NQS7 918 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 TMOD4Q9NZQ9 345 aa18.02■□□□□ 0.48
PFDN6-202ENST00000374607 AFG3L2Q9Y4W6 797 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms