RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 USP17L10C9JJH3 530 aa18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 PLCG2P16885 1265 aa18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 ERVK-9P63128 1117 aa18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 ERVK-24P63145 666 aa18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 GPR142Q7Z601 462 aa18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 PLEKHH3Q7Z736 793 aa18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 NSUN4Q96CB9 384 aaKnown RBP18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 XAGE2Q96GT9 111 aa18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 RAI14Q9P0K7 980 aa18.29■□□□□ 0.52
CDKN1A-202ENST00000373711 SIPA1L1O43166 1804 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 E9PSI1 815 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 BAG3O95817 575 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 TIMM10P62072 90 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 CCNA1P78396 465 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 MFSD14CQ5VZR4 134 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 CRACR2BQ8N4Y2 399 aaPredicted RBP18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 GUCD1Q96NT3 240 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 PA2G4Q9UQ80 394 aaKnown RBP18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 LTBP2Q14767 1821 aa18.28■□□□□ 0.52
CDKN1A-202ENST00000373711 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
CDKN1A-202ENST00000373711 CCND3P30281 292 aaPredicted RBP18.27■□□□□ 0.52
CDKN1A-202ENST00000373711 LHX8Q68G74 356 aa18.27■□□□□ 0.52
CDKN1A-202ENST00000373711 SPATA5Q8NB90 893 aa18.27■□□□□ 0.52
CDKN1A-202ENST00000373711 USP6NLQ92738 828 aa18.27■□□□□ 0.52
CDKN1A-202ENST00000373711 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
CDKN1A-202ENST00000373711 MORN1Q5T089 497 aa18.26■□□□□ 0.51
CDKN1A-202ENST00000373711 ATF7IPQ6VMQ6 1270 aa18.26■□□□□ 0.51
CDKN1A-202ENST00000373711 NEUROD6Q96NK8 337 aa18.26■□□□□ 0.51
CDKN1A-202ENST00000373711 PAGR1Q9BTK6 254 aa18.26■□□□□ 0.51
CDKN1A-202ENST00000373711 SENP6Q9GZR1 1112 aaPredicted RBP18.26■□□□□ 0.51
CDKN1A-202ENST00000373711 TXNRD2Q9NNW7 524 aa18.26■□□□□ 0.51
CDKN1A-202ENST00000373711 DNAH12Q6ZR08 3092 aa18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 MAP2K5Q13163 448 aa18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 USP17L2Q6R6M4 530 aa18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 FOXP4Q8IVH2 680 aaPredicted RBP18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 FAM161BQ96MY7 647 aa18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 LRP2BPQ9P2M1 347 aa18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 RBPJLQ9UBG7 517 aa18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 LAMA2P24043 3122 aaKnown RBP18.25■□□□□ 0.51
CDKN1A-202ENST00000373711 HLA-DOAP06340 250 aa18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 RRP1BQ14684 758 aaKnown RBP18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 CCL14Q16627 93 aa18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 ZNF384Q8TF68 577 aa18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 LPAR1Q92633 364 aa18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 EDC3Q96F86 508 aaKnown RBP18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 API5Q9BZZ5 524 aaKnown RBP18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 PORCNQ9H237 461 aa18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 DDX20Q9UHI6 824 aaKnown RBP18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 IVNS1ABPQ9Y6Y0 642 aa18.24■□□□□ 0.51
CDKN1A-202ENST00000373711 RLFQ13129 1914 aa18.23■□□□□ 0.51
CDKN1A-202ENST00000373711 DNM1LO00429 736 aa18.23■□□□□ 0.51
CDKN1A-202ENST00000373711 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
CDKN1A-202ENST00000373711 ARID4AP29374 1257 aaPredicted RBP18.23■□□□□ 0.51
CDKN1A-202ENST00000373711 TFCP2Q12800 502 aa18.23■□□□□ 0.51
CDKN1A-202ENST00000373711 SH3RF3Q8TEJ3 882 aaPredicted RBP18.23■□□□□ 0.51
CDKN1A-202ENST00000373711 ZBTB21Q9ULJ3 1066 aa18.23■□□□□ 0.51
CDKN1A-202ENST00000373711 MYH1P12882 1939 aa18.23■□□□□ 0.51
CDKN1A-202ENST00000373711 SRGAP3O43295 1099 aa18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 IGSF3O75054 1194 aa18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 CNGA1P29973 690 aa18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 Q3C1V9 767 aa18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 NAA16Q6N069 864 aaPredicted RBP18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 MAFAQ8NHW3 353 aaPredicted RBP18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 SYMPKQ92797 1274 aaKnown RBP18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 FEZ1Q99689 392 aa18.22■□□□□ 0.51
CDKN1A-202ENST00000373711 SLC15A5A6NIM6 579 aa18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 GDF11O95390 407 aa18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 GNAI3P08754 354 aa18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 USP14P54578 494 aa18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 ATP2B2Q01814 1243 aa18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 TBC1D9Q6ZT07 1266 aa18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 METTL16Q86W50 562 aaKnown RBP18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 AATFQ9NY61 560 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 FLT1P17948 1338 aa18.21■□□□□ 0.51
CDKN1A-202ENST00000373711 USP17L15C9J2P7 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 USP17L13C9JLJ4 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 USP17L11C9JVI0 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 PEX10O60683 326 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 ATN1P54259 1190 aaPredicted RBP18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 RTP1P59025 263 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 MAPKAPK5Q8IW41 473 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 ARRDC4Q8NCT1 418 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 CDX2Q99626 313 aaPredicted RBP18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 ZNF236Q9UL36 1845 aa18.2■□□□□ 0.5
CDKN1A-202ENST00000373711 KBTBD13C9JR72 458 aa18.19■□□□□ 0.5
CDKN1A-202ENST00000373711 HOXC6P09630 235 aa18.19■□□□□ 0.5
CDKN1A-202ENST00000373711 CT47B1P0C2W7 299 aaPredicted RBP18.19■□□□□ 0.5
CDKN1A-202ENST00000373711 PTPREP23469 700 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms