RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 HS1BP3Q53T59 392 aa24.21■■□□□ 1.47
SYNC-201ENST00000373484 CWC27Q6UX04 472 aaKnown RBP24.21■■□□□ 1.47
SYNC-201ENST00000373484 ZNF589Q86UQ0 364 aaPredicted RBP24.21■■□□□ 1.47
SYNC-201ENST00000373484 ZKSCAN4Q969J2 545 aaPredicted RBP24.21■■□□□ 1.47
SYNC-201ENST00000373484 NAP1L5Q96NT1 182 aaPredicted RBP24.21■■□□□ 1.47
SYNC-201ENST00000373484 CSADQ9Y600 493 aa24.21■■□□□ 1.47
SYNC-201ENST00000373484 RRP9O43818 475 aaKnown RBP24.2■■□□□ 1.46
SYNC-201ENST00000373484 CASC1Q6TDU7 716 aa24.2■■□□□ 1.46
SYNC-201ENST00000373484 CRACR2BQ8N4Y2 399 aaPredicted RBP24.2■■□□□ 1.46
SYNC-201ENST00000373484 ANP32BQ92688 251 aaKnown RBP24.2■■□□□ 1.46
SYNC-201ENST00000373484 SLC10A4Q96EP9 437 aa24.2■■□□□ 1.46
SYNC-201ENST00000373484 SERPINB13Q9UIV8 391 aa24.2■■□□□ 1.46
SYNC-201ENST00000373484 CCDC171Q6TFL3 1326 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 PHIPQ8WWQ0 1821 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 USP17L12C9JPN9 530 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 USP17L21D6R901 530 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 FOXP2O15409 715 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 GRM1Q13255 1194 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 CTR9Q6PD62 1173 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 ARPP21Q9UBL0 812 aaPredicted RBP24.19■■□□□ 1.46
SYNC-201ENST00000373484 SNCAIPQ9Y6H5 919 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 APPP05067 770 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 CYP2D6P10635 497 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 EVX2Q03828 476 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 NOL9Q5SY16 702 aaKnown RBP24.19■■□□□ 1.46
SYNC-201ENST00000373484 C12orf60Q5U649 245 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 IFNL3Q8IZI9 196 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 USP26Q9BXU7 913 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 ELP3Q9H9T3 547 aa24.19■■□□□ 1.46
SYNC-201ENST00000373484 CHMLP26374 656 aa24.18■■□□□ 1.46
SYNC-201ENST00000373484 SBK1Q52WX2 424 aa24.18■■□□□ 1.46
SYNC-201ENST00000373484 AMOTL1Q8IY63 956 aa24.18■■□□□ 1.46
SYNC-201ENST00000373484 TRIM34Q9BYJ4 488 aa24.18■■□□□ 1.46
SYNC-201ENST00000373484 PCNTO95613 3336 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 TPM2P07951 284 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 GABPAQ06546 454 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 GLIPR1L2Q4G1C9 344 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 VPS53Q5VIR6 699 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 NACAP1Q9BZK3 213 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 CYP2D7A0A087X1C5 515 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 CTNND1O60716 968 aaKnown RBP24.17■■□□□ 1.46
SYNC-201ENST00000373484 TDO2P48775 406 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 WNK4Q96J92 1243 aa24.17■■□□□ 1.46
SYNC-201ENST00000373484 NOGQ13253 232 aa24.16■■□□□ 1.46
SYNC-201ENST00000373484 RRP1BQ14684 758 aaKnown RBP24.16■■□□□ 1.46
SYNC-201ENST00000373484 SCYL3Q8IZE3 742 aa24.16■■□□□ 1.46
SYNC-201ENST00000373484 TAOK2Q9UL54 1235 aa24.16■■□□□ 1.46
SYNC-201ENST00000373484 RAD50Q92878 1312 aa24.15■■□□□ 1.46
SYNC-201ENST00000373484 AOC2O75106 756 aa24.15■■□□□ 1.46
SYNC-201ENST00000373484 SPRYD7Q5W111 196 aa24.15■■□□□ 1.46
SYNC-201ENST00000373484 TATDN1Q6P1N9 297 aa24.15■■□□□ 1.46
SYNC-201ENST00000373484 IL25Q9H293 177 aa24.15■■□□□ 1.46
SYNC-201ENST00000373484 SPDYE5A6NIY4 337 aa24.14■■□□□ 1.46
SYNC-201ENST00000373484 SMIM22K7EJ46 135 aa24.14■■□□□ 1.46
SYNC-201ENST00000373484 ZBTB48P10074 688 aaPredicted RBP24.14■■□□□ 1.46
SYNC-201ENST00000373484 HSPD1P10809 573 aaKnown RBP24.14■■□□□ 1.46
SYNC-201ENST00000373484 NASPP49321 788 aaPredicted RBP24.14■■□□□ 1.46
SYNC-201ENST00000373484 TERF1P54274 439 aa24.14■■□□□ 1.46
SYNC-201ENST00000373484 OPTNQ96CV9 577 aa24.14■■□□□ 1.46
SYNC-201ENST00000373484 NAPBQ9H115 298 aa24.14■■□□□ 1.46
SYNC-201ENST00000373484 DDX49Q9Y6V7 483 aaKnown RBP24.14■■□□□ 1.46
SYNC-201ENST00000373484 LAMA4Q16363 1823 aa24.14■■□□□ 1.46
SYNC-201ENST00000373484 PTPRFP10586 1907 aa24.14■■□□□ 1.46
SYNC-201ENST00000373484 ROBO3Q96MS0 1386 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 ST18O60284 1047 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 REC8O95072 547 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 SHMT1P34896 483 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 GJA5P36382 358 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 MAP2K2P36507 400 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 CAP2P40123 477 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 ALX1Q15699 326 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 ERO1BQ86YB8 467 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 RUFY2Q8WXA3 655 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 CNKSR2Q8WXI2 1034 aa24.14■■□□□ 1.45
SYNC-201ENST00000373484 JMYQ8N9B5 988 aa24.13■■□□□ 1.45
SYNC-201ENST00000373484 DYNLL2Q96FJ2 89 aa24.13■■□□□ 1.45
SYNC-201ENST00000373484 ZIC5Q96T25 663 aa24.13■■□□□ 1.45
SYNC-201ENST00000373484 SWAP70Q9UH65 585 aa24.13■■□□□ 1.45
SYNC-201ENST00000373484 ZMYM6O95789 1325 aa24.12■■□□□ 1.45
SYNC-201ENST00000373484 MINDY4BA8MYZ0 360 aa24.12■■□□□ 1.45
SYNC-201ENST00000373484 MKRN3Q13064 507 aaKnown RBP24.12■■□□□ 1.45
SYNC-201ENST00000373484 C16orf86Q6ZW13 317 aa24.12■■□□□ 1.45
SYNC-201ENST00000373484 ZSCAN30Q86W11 494 aa24.12■■□□□ 1.45
SYNC-201ENST00000373484 OTUD5Q96G74 571 aa24.12■■□□□ 1.45
SYNC-201ENST00000373484 PICK1Q9NRD5 415 aa24.12■■□□□ 1.45
SYNC-201ENST00000373484 PTPRAP18433 802 aa24.11■■□□□ 1.45
SYNC-201ENST00000373484 PPATQ06203 517 aa24.11■■□□□ 1.45
SYNC-201ENST00000373484 SLC44A5Q8NCS7 719 aa24.11■■□□□ 1.45
SYNC-201ENST00000373484 FGAP02671 866 aa24.1■■□□□ 1.45
SYNC-201ENST00000373484 KIF23Q02241 960 aaPredicted RBP24.1■■□□□ 1.45
SYNC-201ENST00000373484 PPIL2Q13356 520 aa24.1■■□□□ 1.45
SYNC-201ENST00000373484 SGSM2O43147 1006 aa24.1■■□□□ 1.45
SYNC-201ENST00000373484 GDF11O95390 407 aa24.1■■□□□ 1.45
SYNC-201ENST00000373484 CDK8P49336 464 aa24.1■■□□□ 1.45
SYNC-201ENST00000373484 JAG1P78504 1218 aa24.1■■□□□ 1.45
SYNC-201ENST00000373484 CERKLQ49MI3 558 aaPredicted RBP24.1■■□□□ 1.45
SYNC-201ENST00000373484 GINM1Q9NU53 330 aa24.1■■□□□ 1.45
SYNC-201ENST00000373484 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.1■■□□□ 1.45
SYNC-201ENST00000373484 ASNSP08243 561 aa24.09■■□□□ 1.45
SYNC-201ENST00000373484 PPARAQ07869 468 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms