RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 IBSPP21815 317 aaPredicted RBP15.57■□□□□ 0.08
USP49-201ENST00000373006 LEKR1Q6ZMV7 388 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 CEP112Q8N8E3 955 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 OXER1Q8TDS5 423 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 PANX2Q96RD6 677 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 L1RE1Q9UN81 338 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 WDR19Q8NEZ3 1342 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 MMP1P03956 469 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 ADD2P35612 726 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 PLCD1P51178 756 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 NT5DC1Q5TFE4 455 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 SRLQ86TD4 932 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 STAMQ92783 540 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 ZNF532Q9HCE3 1301 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 CABP5Q9NP86 173 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 PIH1D3Q9NQM4 214 aaKnown RBP15.57■□□□□ 0.08
USP49-201ENST00000373006 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
USP49-201ENST00000373006 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 CTAGE9A4FU28 777 aa15.56■□□□□ 0.08
USP49-201ENST00000373006 CDC25AP30304 524 aa15.56■□□□□ 0.08
USP49-201ENST00000373006 CCT6AP40227 531 aaKnown RBP15.56■□□□□ 0.08
USP49-201ENST00000373006 FXR1P51114 621 aaKnown RBP eCLIP15.56■□□□□ 0.08
USP49-201ENST00000373006 METTL24Q5JXM2 366 aa15.56■□□□□ 0.08
USP49-201ENST00000373006 APTXQ7Z2E3 356 aaKnown RBP15.56■□□□□ 0.08
USP49-201ENST00000373006 EPSTI1Q96J88 318 aa15.56■□□□□ 0.08
USP49-201ENST00000373006 ATG3Q9NT62 314 aa15.56■□□□□ 0.08
USP49-201ENST00000373006 ACTN4O43707 911 aaKnown RBP15.56■□□□□ 0.08
USP49-201ENST00000373006 PSD3Q9NYI0 1048 aa15.56■□□□□ 0.08
USP49-201ENST00000373006 HNRNPLLQ8WVV9 542 aaKnown RBP15.55■□□□□ 0.08
USP49-201ENST00000373006 TMEM87BQ96K49 555 aa15.55■□□□□ 0.08
USP49-201ENST00000373006 WWC3Q9ULE0 1092 aa15.55■□□□□ 0.08
USP49-201ENST00000373006 ERLIN1O75477 346 aa15.55■□□□□ 0.08
USP49-201ENST00000373006 ATF3P18847 181 aa15.55■□□□□ 0.08
USP49-201ENST00000373006 IFIT5Q13325 482 aaKnown RBP15.55■□□□□ 0.08
USP49-201ENST00000373006 NOA1Q8NC60 698 aaKnown RBP15.55■□□□□ 0.08
USP49-201ENST00000373006 A0A087X0B3 334 aa15.55■□□□□ 0.08
USP49-201ENST00000373006 FAM205CA6NFA0 338 aa15.55■□□□□ 0.08
USP49-201ENST00000373006 FMNL1O95466 1100 aaPredicted RBP15.55■□□□□ 0.08
USP49-201ENST00000373006 CASP8Q14790 479 aa15.55■□□□□ 0.08
USP49-201ENST00000373006 TACC3Q9Y6A5 838 aa15.55■□□□□ 0.08
USP49-201ENST00000373006 RGPD5Q99666 1765 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 MFAP3LO75121 409 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 NCAPH2Q6IBW4 605 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 LDHAL6AQ6ZMR3 332 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 NUP133Q8WUM0 1156 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 AIDAQ96BJ3 306 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 ADD3Q9UEY8 706 aaKnown RBP15.54■□□□□ 0.08
USP49-201ENST00000373006 RAB21Q9UL25 225 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 RNF225M0QZC1 329 aaPredicted RBP15.54■□□□□ 0.08
USP49-201ENST00000373006 EIF3JO75822 258 aaKnown RBP15.54■□□□□ 0.08
USP49-201ENST00000373006 GYPCP04921 128 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 RILPL1Q5EBL4 403 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 SPATA1Q5VX52 437 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 RASGRP2Q7LDG7 609 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 MSANTD4Q8NCY6 345 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 C4BP0C0L5 1744 aa15.54■□□□□ 0.08
USP49-201ENST00000373006 KAT6BQ8WYB5 2073 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 hCG_1642624A0A1W2PR95 340 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 CTAGE15A4D2H0 777 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 CTAGE8P0CG41 777 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 ERCC5P28715 1186 aaPredicted RBP15.53■□□□□ 0.08
USP49-201ENST00000373006 USP5P45974 858 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 CTAGE6Q86UF2 777 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 CTAGE4Q8IX94 777 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■■■□□ 19.2
USP49-201ENST00000373006 SRPRBQ9Y5M8 271 aaKnown RBP15.53■□□□□ 0.08
USP49-201ENST00000373006 PHRF1Q9P1Y6 1649 aaKnown RBP15.53■□□□□ 0.08
USP49-201ENST00000373006 SYNRGQ9UMZ2 1314 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 HSP90B2PQ58FF3 399 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 SGMS1Q86VZ5 419 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 TRIML1Q8N9V2 468 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 RABEP2Q9H5N1 569 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 ADAMTS7Q9UKP4 1686 aa15.53■□□□□ 0.08
USP49-201ENST00000373006 LRRIQ3A6PVS8 624 aaPredicted RBP15.52■□□□□ 0.08
USP49-201ENST00000373006 PDE6AP16499 860 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 IFNAR1P17181 557 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
USP49-201ENST00000373006 ELOA2Q8IYF1 753 aaPredicted RBP15.52■□□□□ 0.08
USP49-201ENST00000373006 TRIM22Q8IYM9 498 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 GDAP1L1Q96MZ0 367 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 SCN11AQ9UI33 1791 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 SLIT3O75094 1523 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 GPTP24298 496 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 ERVK-24P63145 666 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 NAPGQ99747 312 aaPredicted RBP15.52■□□□□ 0.08
USP49-201ENST00000373006 NAA15Q9BXJ9 866 aaKnown RBP15.52■□□□□ 0.08
USP49-201ENST00000373006 VPS16Q9H269 839 aa15.52■□□□□ 0.08
USP49-201ENST00000373006 FILIP1LQ4L180 1135 aa15.52■□□□□ 0.07
USP49-201ENST00000373006 STRBPQ96SI9 672 aaKnown RBP15.52■□□□□ 0.07
USP49-201ENST00000373006 NAPBQ9H115 298 aa15.52■□□□□ 0.07
USP49-201ENST00000373006 CNNM1Q9NRU3 951 aa15.52■□□□□ 0.07
USP49-201ENST00000373006 TRIM10Q9UDY6 481 aa15.52■□□□□ 0.07
USP49-201ENST00000373006 TMEM94Q12767 1356 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 ENC1O14682 589 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 PBX1P40424 430 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 PHKA1P46020 1223 aa15.51■□□□□ 0.07
USP49-201ENST00000373006 AKAP17AQ02040 695 aaKnown RBP15.51■□□□□ 0.07
USP49-201ENST00000373006 RTN1Q16799 776 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms