RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 NACA2Q9H009 215 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 SARNPP82979 210 aaKnown RBP12.81□□□□□ -0.36
VCL-202ENST00000372755 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 SH3TC1Q8TE82 1336 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 POLR2DO15514 142 aaKnown RBP12.81□□□□□ -0.36
VCL-202ENST00000372755 CEP104O60308 925 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 EXOC3O60645 756 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
VCL-202ENST00000372755 VSIG1Q86XK7 387 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 C10orf67Q8IYJ2 551 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 MYCT1Q8N699 235 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
VCL-202ENST00000372755 TRPM2O94759 1503 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 MAGEA1P43355 309 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 HERC4Q5GLZ8 1057 aaPredicted RBP12.8□□□□□ -0.36
VCL-202ENST00000372755 XAGE2Q96GT9 111 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 M0QZ92 97 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 P4HA1P13674 534 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 KRBA2Q6ZNG9 492 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 TSPYL6Q8N831 410 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 PARP2Q9UGN5 583 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 USH1CQ9Y6N9 552 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 RNASE9P60153 205 aaKnown RBP12.8□□□□□ -0.36
VCL-202ENST00000372755 CFAP221Q4G0U5 840 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 SFMBT2Q5VUG0 894 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 SUPT20HQ8NEM7 779 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 BCAP29Q9UHQ4 241 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 KLHL30Q0D2K2 578 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 PHLDB2Q86SQ0 1253 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
VCL-202ENST00000372755 ARHGEF2Q92974 986 aaKnown RBP12.8□□□□□ -0.36
VCL-202ENST00000372755 INPP5BP32019 993 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 ARHGAP25P42331 645 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 SLC1A4P43007 532 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 EIF6P56537 245 aaKnown RBP12.79□□□□□ -0.36
VCL-202ENST00000372755 CALCRLQ16602 461 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 CARD10Q9BWT7 1032 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 LPXNO60711 386 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
VCL-202ENST00000372755 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■□□ 15.9
VCL-202ENST00000372755 RPS6KA1Q15418 735 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 CCDC84Q86UT8 332 aaPredicted RBP12.79□□□□□ -0.36
VCL-202ENST00000372755 EYA1Q99502 592 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 TRIM31Q9BZY9 425 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 YTHDC2Q9H6S0 1430 aaKnown RBP12.79□□□□□ -0.36
VCL-202ENST00000372755 ABCC1P33527 1531 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 GOLGA6BA6NDN3 693 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 GNA14O95837 355 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 CCDC105Q8IYK2 499 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 HACE1Q8IYU2 909 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 IBTKQ9P2D0 1353 aaPredicted RBP12.79□□□□□ -0.36
VCL-202ENST00000372755 ARHGAP6O43182 974 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
VCL-202ENST00000372755 HOXC9P31274 260 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 SLC12A2P55011 1212 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 IP6K1Q92551 441 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 P3H4Q92791 437 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 GPAA1O43292 621 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 PDE6BP35913 854 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 ZNF75DP51815 510 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 BEND3Q5T5X7 828 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 C19orf44Q9H6X5 657 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 MAPK8IP1Q9UQF2 711 aa12.79□□□□□ -0.36
VCL-202ENST00000372755 CD19P15391 556 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 PPP2R5DQ14738 602 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 CCDC89Q8N998 374 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 ATP2A3Q93084 1043 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 RIOK1Q9BRS2 568 aaKnown RBP12.78□□□□□ -0.36
VCL-202ENST00000372755 PARD3Q8TEW0 1356 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 DUOX2Q9NRD8 1548 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 GCNT3O95395 438 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 HOXB7P09629 217 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 BIRC2Q13490 618 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 CABP7Q86V35 215 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 FAM89AQ96GI7 184 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 MRPL44Q9H9J2 332 aaKnown RBP12.78□□□□□ -0.36
VCL-202ENST00000372755 GCP02774 474 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 KRT15P19012 456 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 KMT5BQ4FZB7 885 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 SH2D4BQ5SQS7 431 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 KLHL7Q8IXQ5 586 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 NELFBQ8WX92 580 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 DDX39AO00148 427 aaKnown RBP12.78□□□□□ -0.36
VCL-202ENST00000372755 KRT19P08727 400 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 PSMD6Q15008 389 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 CASC4Q6P4E1 433 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 NT5C3AQ9H0P0 336 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 POSTNQ15063 836 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 RAB17Q9H0T7 212 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 RBSNQ9H1K0 784 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 TAB2Q9NYJ8 693 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
VCL-202ENST00000372755 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.36
VCL-202ENST00000372755 KIF11P52732 1056 aa12.77□□□□□ -0.36
VCL-202ENST00000372755 PPFIA1Q13136 1202 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms