RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 COL2A1P02458 1487 aaPredicted RBP18.84■□□□□ 0.61
C9orf78-201ENST00000372447 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.61
C9orf78-201ENST00000372447 SMIM22K7EJ46 135 aa18.83■□□□□ 0.61
C9orf78-201ENST00000372447 ALX1Q15699 326 aa18.83■□□□□ 0.61
C9orf78-201ENST00000372447 MIGA2Q7L4E1 593 aa18.83■□□□□ 0.61
C9orf78-201ENST00000372447 ZNF408Q9H9D4 720 aa18.83■□□□□ 0.61
C9orf78-201ENST00000372447 PI4KBQ9UBF8 816 aa18.83■□□□□ 0.61
C9orf78-201ENST00000372447 FZD1Q9UP38 647 aa18.83■□□□□ 0.61
C9orf78-201ENST00000372447 ZSCAN22P10073 491 aaPredicted RBP18.83■□□□□ 0.6
C9orf78-201ENST00000372447 SBK1Q52WX2 424 aa18.83■□□□□ 0.6
C9orf78-201ENST00000372447 C12orf60Q5U649 245 aa18.83■□□□□ 0.6
C9orf78-201ENST00000372447 TTC6Q86TZ1 520 aa18.83■□□□□ 0.6
C9orf78-201ENST00000372447 SSC5DA1L4H1 1573 aa18.82■□□□□ 0.6
C9orf78-201ENST00000372447 HLA-DOAP06340 250 aa18.82■□□□□ 0.6
C9orf78-201ENST00000372447 CST9Q5W186 159 aa18.82■□□□□ 0.6
C9orf78-201ENST00000372447 Q6ZUG5 572 aa18.82■□□□□ 0.6
C9orf78-201ENST00000372447 ARPP21Q9UBL0 812 aaPredicted RBP18.82■□□□□ 0.6
C9orf78-201ENST00000372447 CTNNA3Q9UI47 895 aa18.82■□□□□ 0.6
C9orf78-201ENST00000372447 BAZ2AQ9UIF9 1905 aaKnown RBP18.82■□□□□ 0.6
C9orf78-201ENST00000372447 MINDY4BA8MYZ0 360 aa18.81■□□□□ 0.6
C9orf78-201ENST00000372447 CELF2O95319 508 aaKnown RBP18.81■□□□□ 0.6
C9orf78-201ENST00000372447 NF2P35240 595 aa18.81■□□□□ 0.6
C9orf78-201ENST00000372447 PRKG1Q13976 671 aa18.81■□□□□ 0.6
C9orf78-201ENST00000372447 DHX32Q7L7V1 743 aaKnown RBP18.81■□□□□ 0.6
C9orf78-201ENST00000372447 FOXP4Q8IVH2 680 aaPredicted RBP18.81■□□□□ 0.6
C9orf78-201ENST00000372447 ISY1Q9ULR0 285 aaKnown RBP18.81■□□□□ 0.6
C9orf78-201ENST00000372447 MYH1P12882 1939 aa18.81■□□□□ 0.6
C9orf78-201ENST00000372447 FAM196BA6NMK8 535 aa18.81■□□□□ 0.6
C9orf78-201ENST00000372447 E7EWF7 191 aa18.81■□□□□ 0.6
C9orf78-201ENST00000372447 MAP3K10Q02779 954 aa18.81■□□□□ 0.6
C9orf78-201ENST00000372447 DDX60LQ5H9U9 1706 aaKnown RBP18.81■□□□□ 0.6
C9orf78-201ENST00000372447 METTL16Q86W50 562 aaKnown RBP18.81■□□□□ 0.6
C9orf78-201ENST00000372447 AMOTL1Q8IY63 956 aa18.81■□□□□ 0.6
C9orf78-201ENST00000372447 ZMYM6O95789 1325 aa18.8■□□□□ 0.6
C9orf78-201ENST00000372447 NAV1Q8NEY1 1877 aa18.8■□□□□ 0.6
C9orf78-201ENST00000372447 HOOK2Q96ED9 719 aa18.8■□□□□ 0.6
C9orf78-201ENST00000372447 EHD4Q9H223 541 aa18.8■□□□□ 0.6
C9orf78-201ENST00000372447 DNAJC18Q9H819 358 aa18.8■□□□□ 0.6
C9orf78-201ENST00000372447 SERPINB13Q9UIV8 391 aa18.8■□□□□ 0.6
C9orf78-201ENST00000372447 TBC1D12O60347 775 aa18.79■□□□□ 0.6
C9orf78-201ENST00000372447 USP2O75604 605 aaPredicted RBP18.79■□□□□ 0.6
C9orf78-201ENST00000372447 PDIA4P13667 645 aaKnown RBP18.79■□□□□ 0.6
C9orf78-201ENST00000372447 GABPAQ06546 454 aa18.79■□□□□ 0.6
C9orf78-201ENST00000372447 MOB2Q70IA6 237 aa18.79■□□□□ 0.6
C9orf78-201ENST00000372447 DYNLL2Q96FJ2 89 aa18.79■□□□□ 0.6
C9orf78-201ENST00000372447 PPP1R12BO60237 982 aaPredicted RBP18.78■□□□□ 0.6
C9orf78-201ENST00000372447 F13A1P00488 732 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 NCLP19338 710 aaKnown RBP18.78■□□□□ 0.6
C9orf78-201ENST00000372447 EXOSC10Q01780 885 aaKnown RBP18.78■□□□□ 0.6
C9orf78-201ENST00000372447 PPARAQ07869 468 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 IMMTQ16891 758 aaKnown RBP18.78■□□□□ 0.6
C9orf78-201ENST00000372447 DCAF15Q66K64 600 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 STK11IPQ8N1F8 1099 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 CRACR2BQ8N4Y2 399 aaPredicted RBP18.78■□□□□ 0.6
C9orf78-201ENST00000372447 GPT2Q8TD30 523 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.78■□□□□ 0.6
C9orf78-201ENST00000372447 HERC5Q9UII4 1024 aaKnown RBP18.78■□□□□ 0.6
C9orf78-201ENST00000372447 FGD1P98174 961 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 STK3Q13188 491 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 BRF1Q92994 677 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 GTF3C6Q969F1 213 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 GBA2Q9HCG7 927 aaPredicted RBP18.78■□□□□ 0.6
C9orf78-201ENST00000372447 MTMR6Q9Y217 621 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 ATP6V1DQ9Y5K8 247 aa18.78■□□□□ 0.6
C9orf78-201ENST00000372447 SIPA1L1O43166 1804 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 HAND2P61296 217 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 CTDSPL2Q05D32 466 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 TTLL12Q14166 644 aaPredicted RBP18.77■□□□□ 0.6
C9orf78-201ENST00000372447 FOXD4L6Q3SYB3 417 aaPredicted RBP18.77■□□□□ 0.6
C9orf78-201ENST00000372447 FOXD4L3Q6VB84 417 aaPredicted RBP18.77■□□□□ 0.6
C9orf78-201ENST00000372447 SLC44A5Q8NCS7 719 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 KLRG1Q96E93 195 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 ZNF341Q9BYN7 854 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 LRRC2Q9BYS8 371 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 AGXT2Q9BYV1 514 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 ANAPC4Q9UJX5 808 aa18.77■□□□□ 0.6
C9orf78-201ENST00000372447 ANGEL1Q9UNK9 670 aaKnown RBP18.77■□□□□ 0.6
C9orf78-201ENST00000372447 PHF20L1A8MW92 1017 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 DTNBO60941 627 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 PDCP20941 246 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 MAP3K11Q16584 847 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 LARP1BQ659C4 914 aaKnown RBP18.76■□□□□ 0.59
C9orf78-201ENST00000372447 CAVIN1Q6NZI2 390 aaKnown RBP18.76■□□□□ 0.59
C9orf78-201ENST00000372447 C16orf86Q6ZW13 317 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 TRIM34Q9BYJ4 488 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 ZNF213O14771 459 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 MBD3O95983 291 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 SHMT1P34896 483 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 CDK8P49336 464 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 MRE11P49959 708 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 FKBP1BP68106 108 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 RRP1BQ14684 758 aaKnown RBP18.76■□□□□ 0.59
C9orf78-201ENST00000372447 C2orf69Q8N8R5 385 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 NBPF3Q9H094 633 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 INCENPQ9NQS7 918 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 ZNF112Q9UJU3 913 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 TACC3Q9Y6A5 838 aa18.76■□□□□ 0.59
C9orf78-201ENST00000372447 ROBO3Q96MS0 1386 aa18.75■□□□□ 0.59
C9orf78-201ENST00000372447 UBE2Q2LH0YL09 131 aa18.75■□□□□ 0.59
C9orf78-201ENST00000372447 XRCC6P12956 609 aaKnown RBP eCLIP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms