RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 AOC2O75106 756 aa18.96■□□□□ 0.63
PFDN4-201ENST00000371419 SLC3A2P08195 630 aaKnown RBP18.96■□□□□ 0.63
PFDN4-201ENST00000371419 PPATQ06203 517 aa18.96■□□□□ 0.63
PFDN4-201ENST00000371419 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
PFDN4-201ENST00000371419 OTUD5Q96G74 571 aa18.96■□□□□ 0.63
PFDN4-201ENST00000371419 DOCK1Q14185 1865 aa18.95■□□□□ 0.62
PFDN4-201ENST00000371419 LAMB1P07942 1786 aa18.95■□□□□ 0.62
PFDN4-201ENST00000371419 GDF11O95390 407 aa18.95■□□□□ 0.62
PFDN4-201ENST00000371419 ASNSP08243 561 aa18.95■□□□□ 0.62
PFDN4-201ENST00000371419 PTPRAP18433 802 aa18.95■□□□□ 0.62
PFDN4-201ENST00000371419 GJA5P36382 358 aa18.95■□□□□ 0.62
PFDN4-201ENST00000371419 MAP2K2P36507 400 aa18.95■□□□□ 0.62
PFDN4-201ENST00000371419 MKRN3Q13064 507 aaKnown RBP18.95■□□□□ 0.62
PFDN4-201ENST00000371419 ZNF287Q9HBT7 754 aa18.95■□□□□ 0.62
PFDN4-201ENST00000371419 PPIL2Q13356 520 aa18.94■□□□□ 0.62
PFDN4-201ENST00000371419 ABCB5Q2M3G0 1257 aa18.94■□□□□ 0.62
PFDN4-201ENST00000371419 KIAA1211Q6ZU35 1233 aa18.94■□□□□ 0.62
PFDN4-201ENST00000371419 STK11IPQ8N1F8 1099 aa18.94■□□□□ 0.62
PFDN4-201ENST00000371419 MKNK2Q9HBH9 465 aa18.94■□□□□ 0.62
PFDN4-201ENST00000371419 CTNNA3Q9UI47 895 aa18.94■□□□□ 0.62
PFDN4-201ENST00000371419 ANAPC4Q9UJX5 808 aa18.94■□□□□ 0.62
PFDN4-201ENST00000371419 ZBTB21Q9ULJ3 1066 aa18.94■□□□□ 0.62
PFDN4-201ENST00000371419 GH2P01242 217 aa18.93■□□□□ 0.62
PFDN4-201ENST00000371419 JAG1P78504 1218 aa18.93■□□□□ 0.62
PFDN4-201ENST00000371419 KIF23Q02241 960 aaPredicted RBP18.93■□□□□ 0.62
PFDN4-201ENST00000371419 PDE4BQ07343 736 aa18.93■□□□□ 0.62
PFDN4-201ENST00000371419 CCDC17Q96LX7 622 aa18.93■□□□□ 0.62
PFDN4-201ENST00000371419 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
PFDN4-201ENST00000371419 ZHX2Q9Y6X8 837 aa18.93■□□□□ 0.62
PFDN4-201ENST00000371419 USP17L5A8MUK1 530 aa18.92■□□□□ 0.62
PFDN4-201ENST00000371419 ANP32AP39687 249 aaKnown RBP18.92■□□□□ 0.62
PFDN4-201ENST00000371419 PTH1RQ03431 593 aa18.92■□□□□ 0.62
PFDN4-201ENST00000371419 CTDSPL2Q05D32 466 aa18.92■□□□□ 0.62
PFDN4-201ENST00000371419 SHROOM1Q2M3G4 852 aaPredicted RBP18.92■□□□□ 0.62
PFDN4-201ENST00000371419 ZIC5Q96T25 663 aa18.92■□□□□ 0.62
PFDN4-201ENST00000371419 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.92■□□□□ 0.62
PFDN4-201ENST00000371419 ATAD5Q96QE3 1844 aa18.92■□□□□ 0.62
PFDN4-201ENST00000371419 MPHOSPH10O00566 681 aaKnown RBP18.91■□□□□ 0.62
PFDN4-201ENST00000371419 IRF6O14896 467 aa18.91■□□□□ 0.62
PFDN4-201ENST00000371419 KCNA4P22459 653 aa18.91■□□□□ 0.62
PFDN4-201ENST00000371419 REM2Q8IYK8 340 aaPredicted RBP18.91■□□□□ 0.62
PFDN4-201ENST00000371419 TBC1D2Q9BYX2 928 aa18.91■□□□□ 0.62
PFDN4-201ENST00000371419 THSD7BQ9C0I4 1608 aa18.91■□□□□ 0.62
PFDN4-201ENST00000371419 PCNTO95613 3336 aa18.91■□□□□ 0.62
PFDN4-201ENST00000371419 MYH8P13535 1937 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 MANSC4A6NHS7 340 aaPredicted RBP18.9■□□□□ 0.62
PFDN4-201ENST00000371419 ZNF213O14771 459 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 AKR1B1P15121 316 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 GTF2A2P52657 109 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 HAND2P61296 217 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 CCDC84Q86UT8 332 aaPredicted RBP18.9■□□□□ 0.62
PFDN4-201ENST00000371419 AS3MTQ9HBK9 375 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 KCNH4Q9UQ05 1017 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 AFG3L2Q9Y4W6 797 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
PFDN4-201ENST00000371419 CXCL11O14625 94 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 PRDM1O75626 825 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 RASA1P20936 1047 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 INHBEP58166 350 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 SREBF2Q12772 1141 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 SNAPC2Q13487 334 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 RAB3GAP1Q15042 981 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 IMMTQ16891 758 aaKnown RBP18.9■□□□□ 0.62
PFDN4-201ENST00000371419 TMEM179Q6ZVK1 233 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 ZNF444Q8N0Y2 327 aaPredicted RBP18.9■□□□□ 0.62
PFDN4-201ENST00000371419 JMYQ8N9B5 988 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 MAP4K1Q92918 833 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 LSG1Q9H089 658 aaKnown RBP18.9■□□□□ 0.62
PFDN4-201ENST00000371419 ANO2Q9NQ90 1003 aa18.9■□□□□ 0.62
PFDN4-201ENST00000371419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
PFDN4-201ENST00000371419 ZNF280CQ8ND82 737 aa18.89■□□□□ 0.61
PFDN4-201ENST00000371419 MS4A4AQ96JQ5 239 aa18.89■□□□□ 0.61
PFDN4-201ENST00000371419 WDR18Q9BV38 432 aa18.89■□□□□ 0.61
PFDN4-201ENST00000371419 FGRP09769 529 aa18.88■□□□□ 0.61
PFDN4-201ENST00000371419 PCP11498 1178 aaKnown RBP18.88■□□□□ 0.61
PFDN4-201ENST00000371419 CETPP11597 493 aa18.88■□□□□ 0.61
PFDN4-201ENST00000371419 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
PFDN4-201ENST00000371419 MAP2K1Q02750 393 aaPredicted RBP18.88■□□□□ 0.61
PFDN4-201ENST00000371419 SPP2Q13103 211 aa18.88■□□□□ 0.61
PFDN4-201ENST00000371419 SEPT2Q15019 361 aa18.88■□□□□ 0.61
PFDN4-201ENST00000371419 AKNAD1Q5T1N1 836 aa18.88■□□□□ 0.61
PFDN4-201ENST00000371419 NBPF3Q9H094 633 aa18.88■□□□□ 0.61
PFDN4-201ENST00000371419 RNF41Q9H4P4 317 aaPredicted RBP18.88■□□□□ 0.61
PFDN4-201ENST00000371419 PHIPQ8WWQ0 1821 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 CCL15-CCL14A0A0B4J2E2 113 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 TESPA1A2RU30 521 aaPredicted RBP18.87■□□□□ 0.61
PFDN4-201ENST00000371419 TRIM75PA6NK02 468 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 ORC4O43929 436 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 TM4SF4P48230 202 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 CCL15Q16663 113 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 C8orf34Q49A92 452 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 MFSD6Q6ZSS7 791 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 TBC1D10CQ8IV04 446 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 STAG1Q8WVM7 1258 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 INCENPQ9NQS7 918 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
PFDN4-201ENST00000371419 TACC3Q9Y6A5 838 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 LAMA4Q16363 1823 aa18.87■□□□□ 0.61
PFDN4-201ENST00000371419 BRI3BPQ8WY22 251 aa18.86■□□□□ 0.61
PFDN4-201ENST00000371419 TOMM22Q9NS69 142 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms