RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 WDR93Q6P2C0 686 aa16.27■□□□□ 0.2
PHTF1-204ENST00000369604 USP49Q70CQ1 688 aa16.27■□□□□ 0.2
PHTF1-204ENST00000369604 NOSTRINQ8IVI9 506 aa16.27■□□□□ 0.2
PHTF1-204ENST00000369604 TRIML1Q8N9V2 468 aa16.27■□□□□ 0.2
PHTF1-204ENST00000369604 PUS7LQ9H0K6 701 aaKnown RBP16.27■□□□□ 0.2
PHTF1-204ENST00000369604 TRIM10Q9UDY6 481 aa16.27■□□□□ 0.2
PHTF1-204ENST00000369604 SHTN1A0MZ66 631 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 H0YHG0 523 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 GYPCP04921 128 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 SSRP1Q08945 709 aaKnown RBP16.27■□□□□ 0.19
PHTF1-204ENST00000369604 CYP26C1Q6V0L0 522 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 ATG9AQ7Z3C6 839 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 SUGP1Q8IWZ8 645 aaKnown RBP16.27■□□□□ 0.19
PHTF1-204ENST00000369604 BCAS4Q8TDM0 211 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 KAT14Q9H8E8 782 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 SENP2Q9HC62 589 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 SEC31BQ9NQW1 1179 aa16.27■□□□□ 0.19
PHTF1-204ENST00000369604 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.19
PHTF1-204ENST00000369604 B4E1Z4 1266 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 USP14P54578 494 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 APOA5Q6Q788 366 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 DIS3L2Q8IYB7 885 aaKnown RBP16.26■□□□□ 0.19
PHTF1-204ENST00000369604 ANKRD20A12PQ8NF67 263 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 VIPAS39Q9H9C1 493 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 CEP126Q9P2H0 1117 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 GPAA1O43292 621 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 KRT9P35527 623 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 ERVK-24P63145 666 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 TOPAZ1Q8N9V7 1692 aa16.26■□□□□ 0.19
PHTF1-204ENST00000369604 PRPF6O94906 941 aaKnown RBP16.25■□□□□ 0.19
PHTF1-204ENST00000369604 SARSP49591 514 aaKnown RBP16.25■□□□□ 0.19
PHTF1-204ENST00000369604 COG1Q8WTW3 980 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 INPP5BP32019 993 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 MAP2K2P36507 400 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 USP8P40818 1118 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 SETQ01105 290 aaPredicted RBP16.25■□□□□ 0.19
PHTF1-204ENST00000369604 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 CCDC51Q96ER9 411 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 MMS19Q96T76 1030 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 EHD4Q9H223 541 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 GOLGA6BA6NDN3 693 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 CPP00450 1065 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 PTPREP23469 700 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 AARSP49588 968 aaKnown RBP eCLIP16.25■□□□□ 0.19
PHTF1-204ENST00000369604 TMEM67Q5HYA8 995 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 TTC5Q8N0Z6 440 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 SECISBP2LQ93073 1101 aaKnown RBP16.25■□□□□ 0.19
PHTF1-204ENST00000369604 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
PHTF1-204ENST00000369604 MYO1AQ9UBC5 1043 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 SAMM50Q9Y512 469 aa16.25■□□□□ 0.19
PHTF1-204ENST00000369604 MRC1P22897 1456 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 STAMQ92783 540 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 CCDC85AQ96PX6 553 aaPredicted RBP16.24■□□□□ 0.19
PHTF1-204ENST00000369604 FBXO2Q9UK22 296 aaPredicted RBP16.24■□□□□ 0.19
PHTF1-204ENST00000369604 PCDHB6Q9Y5E3 794 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 SAR1BQ9Y6B6 198 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 FOXP2O15409 715 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 ZFYP08048 801 aaPredicted RBP16.24■□□□□ 0.19
PHTF1-204ENST00000369604 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
PHTF1-204ENST00000369604 ARHGAP25P42331 645 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 IRAK1P51617 712 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 APPBP2Q92624 585 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 KAT2BQ92831 832 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 PUS3Q9BZE2 481 aaKnown RBP16.24■□□□□ 0.19
PHTF1-204ENST00000369604 CSRNP2Q9H175 543 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 ABHD10Q9NUJ1 306 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 CTNND2Q9UQB3 1225 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
PHTF1-204ENST00000369604 EYA2O00167 538 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 HNRNPH1P31943 449 aaKnown RBP16.23■□□□□ 0.19
PHTF1-204ENST00000369604 GNGT1P63211 74 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 TSR1Q2NL82 804 aaKnown RBP16.23■□□□□ 0.19
PHTF1-204ENST00000369604 NT5DC1Q5TFE4 455 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 CAPS2Q9BXY5 557 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 TAB2Q9NYJ8 693 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 PXDNQ92626 1479 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
PHTF1-204ENST00000369604 ADORA1P30542 326 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 ZAP70P43403 619 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 CCDC122Q5T0U0 273 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 CEP89Q96ST8 783 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 SELENOOQ9BVL4 669 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 CXorf56Q9H5V9 222 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 TFR2Q9UP52 801 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 SLC12A7Q9Y666 1083 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 SH2B2O14492 632 aaPredicted RBP16.23■□□□□ 0.19
PHTF1-204ENST00000369604 TOB1P50616 345 aaPredicted RBP16.23■□□□□ 0.19
PHTF1-204ENST00000369604 NR5A1Q13285 461 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 PI16Q6UXB8 463 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 APTXQ7Z2E3 356 aaKnown RBP16.23■□□□□ 0.19
PHTF1-204ENST00000369604 KIAA1328Q86T90 577 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 CHP1Q99653 195 aa16.23■□□□□ 0.19
PHTF1-204ENST00000369604 EPN1Q9Y6I3 576 aaPredicted RBP16.23■□□□□ 0.19
PHTF1-204ENST00000369604 ATP1A1P05023 1023 aaKnown RBP16.22■□□□□ 0.19
PHTF1-204ENST00000369604 AMPD2Q01433 879 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms