RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 USP48Q86UV5 1035 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 JDP2Q8WYK2 163 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 OSBPL5Q9H0X9 879 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-204ENST00000369530 GINM1Q9NU53 330 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 CALCOCO1Q9P1Z2 691 aa8.16□□□□□ -1.1
CSDE1-204ENST00000369530 CCDC85AQ96PX6 553 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-204ENST00000369530 SLKQ9H2G2 1235 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-204ENST00000369530 C9orf78Q9NZ63 289 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-204ENST00000369530 MORC2Q9Y6X9 1032 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-204ENST00000369530 CHD7Q9P2D1 2997 aa8.15□□□□□ -1.1
CSDE1-204ENST00000369530 CBX1P83916 185 aa8.15□□□□□ -1.1
CSDE1-204ENST00000369530 RGMBQ6NW40 437 aa8.15□□□□□ -1.1
CSDE1-204ENST00000369530 CTR9Q6PD62 1173 aa8.15□□□□□ -1.1
CSDE1-204ENST00000369530 RNF186Q9NXI6 227 aa8.15□□□□□ -1.1
CSDE1-204ENST00000369530 COL6A3P12111 3177 aa8.15□□□□□ -1.1
CSDE1-204ENST00000369530 NBPF20Q3BBV1 942 aa8.15□□□□□ -1.1
CSDE1-204ENST00000369530 PDCL2Q8N4E4 241 aa8.15□□□□□ -1.1
CSDE1-204ENST00000369530 SLURP2P0DP57 97 aa8.15□□□□□ -1.11
CSDE1-204ENST00000369530 GSPT1P15170 499 aaKnown RBP8.15□□□□□ -1.11
CSDE1-204ENST00000369530 HOXA7P31268 230 aaPredicted RBP8.15□□□□□ -1.11
CSDE1-204ENST00000369530 NOP2P46087 812 aaKnown RBP8.15□□□□□ -1.11
CSDE1-204ENST00000369530 UBE3CQ15386 1083 aa8.15□□□□□ -1.11
CSDE1-204ENST00000369530 SHROOM1Q2M3G4 852 aaPredicted RBP8.15□□□□□ -1.11
CSDE1-204ENST00000369530 MFSD14BQ5SR56 506 aa8.15□□□□□ -1.11
CSDE1-204ENST00000369530 MOB2Q70IA6 237 aa8.15□□□□□ -1.11
CSDE1-204ENST00000369530 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.11
CSDE1-204ENST00000369530 APBB1O00213 710 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 AOC2O75106 756 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 PPIL2Q13356 520 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 VGLL4Q14135 290 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 SLC4A10Q6U841 1118 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 CNPY4Q8N129 248 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 OTUD7AQ8TE49 926 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-204ENST00000369530 BRI3BPQ8WY22 251 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 RWDD1Q9H446 243 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-204ENST00000369530 ANKIB1Q9P2G1 1089 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 ZAP70P43403 619 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 ALX1Q15699 326 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 GIMAP6Q6P9H5 292 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 IFNL1Q8IU54 200 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 CLMNQ96JQ2 1002 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 TMEM39BQ9GZU3 492 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 GZF1Q9H116 711 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-204ENST00000369530 AKAP2Q9Y2D5 859 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 MAST3O60307 1309 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 COL13A1Q5TAT6 717 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-204ENST00000369530 FGD4Q96M96 766 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 GBP4Q96PP9 640 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 GBA2Q9HCG7 927 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-204ENST00000369530 BRMS1Q9HCU9 246 aa8.14□□□□□ -1.11
CSDE1-204ENST00000369530 ZNF219Q9P2Y4 722 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-204ENST00000369530 KCNJ4P48050 445 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 PLEKHM2Q8IWE5 1019 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 FEZ2Q9UHY8 353 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-204ENST00000369530 DMDP11532 3685 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 LOXHD1Q8IVV2 1947 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 SCN10AQ9Y5Y9 1956 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 TERF2Q15554 542 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 ANKRD23Q86SG2 305 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 SH3RF3Q8TEJ3 882 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-204ENST00000369530 ANKS1AQ92625 1134 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 MKL1Q969V6 931 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 CAPNS2Q96L46 248 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 MORF4L1Q9UBU8 362 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 PPATQ06203 517 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 MAP3K21Q5TCX8 1036 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 PIBF1Q8WXW3 757 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 MPHOSPH8Q99549 860 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 DDX41Q9UJV9 622 aaKnown RBP8.13□□□□□ -1.11
CSDE1-204ENST00000369530 RALGAPA2Q2PPJ7 1873 aa8.13□□□□□ -1.11
CSDE1-204ENST00000369530 GSG1L2A8MUP6 293 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 SNHG28P0DPA3 235 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 RASA3Q14644 834 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 METTL24Q5JXM2 366 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 ZMYM1Q5SVZ6 1142 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 ARMC5Q96C12 935 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 GJD2Q9UKL4 321 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 MCM3APO60318 1980 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 UNC80Q8N2C7 3258 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 UQCRFS1P1P0C7P4 283 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 PTPRAP18433 802 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 IFFO2Q5TF58 517 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 C16orf86Q6ZW13 317 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 FBXL16Q8N461 479 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 TNPO1Q92973 898 aaKnown RBP8.12□□□□□ -1.11
CSDE1-204ENST00000369530 KIF1BPQ96EK5 621 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 TDRD3Q9H7E2 651 aaKnown RBP8.12□□□□□ -1.11
CSDE1-204ENST00000369530 SLFNL1Q499Z3 407 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 STRBPQ96SI9 672 aaKnown RBP8.12□□□□□ -1.11
CSDE1-204ENST00000369530 KATNBL1Q9H079 304 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 FZD1Q9UP38 647 aa8.12□□□□□ -1.11
CSDE1-204ENST00000369530 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-204ENST00000369530 CYP4F22Q6NT55 531 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 SHISA4Q96DD7 197 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 UPF2Q9HAU5 1272 aaKnown RBP8.11□□□□□ -1.11
CSDE1-204ENST00000369530 C6orf229H3BNL8 230 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 DEFB115Q30KQ5 88 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 EGFL6Q8IUX8 553 aa8.11□□□□□ -1.11
CSDE1-204ENST00000369530 NCAPGQ9BPX3 1015 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms