RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 MCCP23508 829 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 GTF2A2P52657 109 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 PPIL2Q13356 520 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 C8orf34Q49A92 452 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 CTR9Q6PD62 1173 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 SCYL3Q8IZE3 742 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 OTUD5Q96G74 571 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 MS4A4AQ96JQ5 239 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 EHD4Q9H223 541 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 RNF186Q9NXI6 227 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 TAOK2Q9UL54 1235 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 RBM8AQ9Y5S9 174 aaKnown RBP15.04■□□□□ -0
EFNA1-201ENST00000368406 ZNF213O14771 459 aa15.03■□□□□ -0
EFNA1-201ENST00000368406 FOXP2O15409 715 aa15.03■□□□□ -0
EFNA1-201ENST00000368406 HAND2P61296 217 aa15.03■□□□□ -0
EFNA1-201ENST00000368406 PPARAQ07869 468 aa15.03■□□□□ -0
EFNA1-201ENST00000368406 ALX1Q15699 326 aa15.03■□□□□ -0
EFNA1-201ENST00000368406 LSG1Q9H089 658 aaKnown RBP15.03■□□□□ -0
EFNA1-201ENST00000368406 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
EFNA1-201ENST00000368406 PICK1Q9NRD5 415 aa15.03■□□□□ -0
EFNA1-201ENST00000368406 TOMM22Q9NS69 142 aa15.03■□□□□ -0
EFNA1-201ENST00000368406 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.03■□□□□ -0
EFNA1-201ENST00000368406 SERPINB13Q9UIV8 391 aa15.03■□□□□ -0
EFNA1-201ENST00000368406 IRF6O14896 467 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 ALDH1A1P00352 501 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 SLURP2P0DP57 97 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 PTPRAP18433 802 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 CAP2P40123 477 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 SBK1Q52WX2 424 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 C12orf60Q5U649 245 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 RNF20Q5VTR2 975 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 IFNL1Q8IU54 200 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 PRDM10Q9NQV6 1147 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 GINM1Q9NU53 330 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 SIPA1L1O43166 1804 aa15.02■□□□□ -0
EFNA1-201ENST00000368406 FAM196BA6NMK8 535 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 HSPA8P11142 646 aaKnown RBP15.01□□□□□ -0.01
EFNA1-201ENST00000368406 CETPP11597 493 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 PLCD1P51178 756 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 CTDSPL2Q05D32 466 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 PDE4BQ07343 736 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 SNAPC2Q13487 334 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 OTUD7BQ6GQQ9 843 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 MAP4K1Q92918 833 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 CFHR5Q9BXR6 569 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 DNAJC18Q9H819 358 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 MKNK2Q9HBH9 465 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 ZNF287Q9HBT7 754 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 KCNH4Q9UQ05 1017 aa15.01□□□□□ -0.01
EFNA1-201ENST00000368406 CXCL11O14625 94 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 TRPA1O75762 1119 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 TATDN1Q6P1N9 297 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 DYNLL2Q96FJ2 89 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 TBC1D2Q9BYX2 928 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 SWAP70Q9UH65 585 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 ZHX2Q9Y6X8 837 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 ROBO3Q96MS0 1386 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 DOCK1Q14185 1865 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 ZKSCAN1P17029 563 aaPredicted RBP15□□□□□ -0.01
EFNA1-201ENST00000368406 LBX1P52954 281 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 EVX2Q03828 476 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 GABPAQ06546 454 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 RRP1BQ14684 758 aaKnown RBP15□□□□□ -0.01
EFNA1-201ENST00000368406 RRP12Q5JTH9 1297 aaKnown RBP15□□□□□ -0.01
EFNA1-201ENST00000368406 BRI3BPQ8WY22 251 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 PTPN18Q99952 460 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 RNF41Q9H4P4 317 aaPredicted RBP15□□□□□ -0.01
EFNA1-201ENST00000368406 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
EFNA1-201ENST00000368406 CCL15-CCL14A0A0B4J2E2 113 aa14.99□□□□□ -0.01
EFNA1-201ENST00000368406 IGF2BP3O00425 579 aaKnown RBP eCLIP14.99□□□□□ -0.01
EFNA1-201ENST00000368406 ASNSP08243 561 aa14.99□□□□□ -0.01
EFNA1-201ENST00000368406 CCL15Q16663 113 aa14.99□□□□□ -0.01
EFNA1-201ENST00000368406 NOM1Q5C9Z4 860 aaKnown RBP14.99□□□□□ -0.01
EFNA1-201ENST00000368406 CREB3L3Q68CJ9 461 aa14.99□□□□□ -0.01
EFNA1-201ENST00000368406 MFSD6Q6ZSS7 791 aa14.99□□□□□ -0.01
EFNA1-201ENST00000368406 C16orf86Q6ZW13 317 aa14.99□□□□□ -0.01
EFNA1-201ENST00000368406 ZCCHC17Q9NP64 241 aaKnown RBP14.99□□□□□ -0.01
EFNA1-201ENST00000368406 ATAD5Q96QE3 1844 aa14.98□□□□□ -0.01
EFNA1-201ENST00000368406 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
EFNA1-201ENST00000368406 SLC27A2O14975 620 aa14.98□□□□□ -0.01
EFNA1-201ENST00000368406 CDK8P49336 464 aa14.98□□□□□ -0.01
EFNA1-201ENST00000368406 TRDNQ13061 729 aa14.98□□□□□ -0.01
EFNA1-201ENST00000368406 RALYLQ86SE5 291 aaKnown RBP14.98□□□□□ -0.01
EFNA1-201ENST00000368406 SLC44A5Q8NCS7 719 aa14.98□□□□□ -0.01
EFNA1-201ENST00000368406 ANAPC4Q9UJX5 808 aa14.98□□□□□ -0.01
EFNA1-201ENST00000368406 USP17L5A8MUK1 530 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 SMIM22K7EJ46 135 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 EPB41L2O43491 1005 aaKnown RBP14.97□□□□□ -0.01
EFNA1-201ENST00000368406 PRDM1O75626 825 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 SEC24BO95487 1268 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 CYP21A2P08686 494 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 SHMT1P34896 483 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 CERKLQ49MI3 558 aaPredicted RBP14.97□□□□□ -0.01
EFNA1-201ENST00000368406 AKNAD1Q5T1N1 836 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 FASTKD5Q7L8L6 764 aaKnown RBP14.97□□□□□ -0.01
EFNA1-201ENST00000368406 TBC1D10CQ8IV04 446 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
EFNA1-201ENST00000368406 WDR18Q9BV38 432 aa14.97□□□□□ -0.01
EFNA1-201ENST00000368406 USP26Q9BXU7 913 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms