RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 ASNSP08243 561 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 INHBEP58166 350 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 DYNLL2Q96FJ2 89 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 OTUD5Q96G74 571 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 MS4A4AQ96JQ5 239 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 PHIPQ8WWQ0 1821 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 TESPA1A2RU30 521 aaPredicted RBP22.28■■□□□ 1.16
LMNA-204ENST00000368298 MANSC4A6NHS7 340 aaPredicted RBP22.28■■□□□ 1.16
LMNA-204ENST00000368298 HSPA1AP0DMV8 641 aaKnown RBP22.28■■□□□ 1.16
LMNA-204ENST00000368298 HSPA1BP0DMV9 641 aaKnown RBP22.28■■□□□ 1.16
LMNA-204ENST00000368298 TM4SF4P48230 202 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 CDK8P49336 464 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 JAG1P78504 1218 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 CERKLQ49MI3 558 aaPredicted RBP22.28■■□□□ 1.16
LMNA-204ENST00000368298 DSCC1Q9BVC3 393 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 TBC1D2Q9BYX2 928 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 ANAPC4Q9UJX5 808 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 KCNH4Q9UQ05 1017 aa22.28■■□□□ 1.16
LMNA-204ENST00000368298 IRF6O14896 467 aa22.27■■□□□ 1.16
LMNA-204ENST00000368298 SGSM2O43147 1006 aa22.27■■□□□ 1.16
LMNA-204ENST00000368298 MAP2K1Q02750 393 aaPredicted RBP22.27■■□□□ 1.16
LMNA-204ENST00000368298 AFG3L2Q9Y4W6 797 aa22.27■■□□□ 1.16
LMNA-204ENST00000368298 MINDY4BA8MYZ0 360 aa22.26■■□□□ 1.15
LMNA-204ENST00000368298 GTF2A2P52657 109 aa22.26■■□□□ 1.15
LMNA-204ENST00000368298 PPARAQ07869 468 aa22.26■■□□□ 1.15
LMNA-204ENST00000368298 SLC44A5Q8NCS7 719 aa22.26■■□□□ 1.15
LMNA-204ENST00000368298 CCDC17Q96LX7 622 aa22.26■■□□□ 1.15
LMNA-204ENST00000368298 ZBTB21Q9ULJ3 1066 aa22.26■■□□□ 1.15
LMNA-204ENST00000368298 ZHX2Q9Y6X8 837 aa22.26■■□□□ 1.15
LMNA-204ENST00000368298 MYH8P13535 1937 aa22.25■■□□□ 1.15
LMNA-204ENST00000368298 CXCL11O14625 94 aa22.25■■□□□ 1.15
LMNA-204ENST00000368298 SREBF2Q12772 1141 aa22.25■■□□□ 1.15
LMNA-204ENST00000368298 MKRN3Q13064 507 aaKnown RBP22.25■■□□□ 1.15
LMNA-204ENST00000368298 WBP1LQ9NX94 342 aa22.25■■□□□ 1.15
LMNA-204ENST00000368298 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.25■■□□□ 1.15
LMNA-204ENST00000368298 USP17L5A8MUK1 530 aa22.24■■□□□ 1.15
LMNA-204ENST00000368298 GDF11O95390 407 aa22.24■■□□□ 1.15
LMNA-204ENST00000368298 ABCB5Q2M3G0 1257 aa22.24■■□□□ 1.15
LMNA-204ENST00000368298 WDR18Q9BV38 432 aa22.24■■□□□ 1.15
LMNA-204ENST00000368298 ZNF287Q9HBT7 754 aa22.24■■□□□ 1.15
LMNA-204ENST00000368298 GH2P01242 217 aa22.23■■□□□ 1.15
LMNA-204ENST00000368298 SNAPC2Q13487 334 aa22.23■■□□□ 1.15
LMNA-204ENST00000368298 CABP5Q9NP86 173 aa22.23■■□□□ 1.15
LMNA-204ENST00000368298 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.23■■□□□ 1.15
LMNA-204ENST00000368298 SLC3A2P08195 630 aaKnown RBP22.22■■□□□ 1.15
LMNA-204ENST00000368298 FGRP09769 529 aa22.22■■□□□ 1.15
LMNA-204ENST00000368298 SHROOM1Q2M3G4 852 aaPredicted RBP22.22■■□□□ 1.15
LMNA-204ENST00000368298 ESYT1Q9BSJ8 1104 aa22.22■■□□□ 1.15
LMNA-204ENST00000368298 CDC45O75419 566 aa22.22■■□□□ 1.15
LMNA-204ENST00000368298 CETPP11597 493 aa22.22■■□□□ 1.15
LMNA-204ENST00000368298 RASA1P20936 1047 aa22.22■■□□□ 1.15
LMNA-204ENST00000368298 GUCY1A2P33402 732 aa22.22■■□□□ 1.15
LMNA-204ENST00000368298 ZNF280CQ8ND82 737 aa22.22■■□□□ 1.15
LMNA-204ENST00000368298 AS3MTQ9HBK9 375 aa22.22■■□□□ 1.15
LMNA-204ENST00000368298 PTPRFP10586 1907 aa22.21■■□□□ 1.15
LMNA-204ENST00000368298 PDE4BQ07343 736 aa22.21■■□□□ 1.15
LMNA-204ENST00000368298 TMEM179Q6ZVK1 233 aa22.21■■□□□ 1.15
LMNA-204ENST00000368298 BRI3BPQ8WY22 251 aa22.21■■□□□ 1.15
LMNA-204ENST00000368298 CTNNA3Q9UI47 895 aa22.21■■□□□ 1.15
LMNA-204ENST00000368298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.21■■□□□ 1.15
LMNA-204ENST00000368298 A0A0G2JLL6 359 aaPredicted RBP22.2■■□□□ 1.14
LMNA-204ENST00000368298 MOGSQ13724 837 aa22.2■■□□□ 1.14
LMNA-204ENST00000368298 CASC1Q6TDU7 716 aa22.2■■□□□ 1.14
LMNA-204ENST00000368298 PRRT2Q7Z6L0 340 aaPredicted RBP22.2■■□□□ 1.14
LMNA-204ENST00000368298 CCDC84Q86UT8 332 aaPredicted RBP22.2■■□□□ 1.14
LMNA-204ENST00000368298 IFNL1Q8IU54 200 aa22.2■■□□□ 1.14
LMNA-204ENST00000368298 PTPN18Q99952 460 aa22.2■■□□□ 1.14
LMNA-204ENST00000368298 MKNK2Q9HBH9 465 aa22.2■■□□□ 1.14
LMNA-204ENST00000368298 LAMA4Q16363 1823 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 GREB1LQ9C091 1923 aaPredicted RBP22.19■■□□□ 1.14
LMNA-204ENST00000368298 CCL15-CCL14A0A0B4J2E2 113 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 CA12O43570 354 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 PCP11498 1178 aaKnown RBP22.19■■□□□ 1.14
LMNA-204ENST00000368298 AKR1B1P15121 316 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 PTH1RQ03431 593 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 CTDSPL2Q05D32 466 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 SPP2Q13103 211 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 CCL15Q16663 113 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 SH3D19Q5HYK7 790 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 MAP4K1Q92918 833 aa22.19■■□□□ 1.14
LMNA-204ENST00000368298 ORC4O43929 436 aa22.18■■□□□ 1.14
LMNA-204ENST00000368298 ALDH1A1P00352 501 aa22.18■■□□□ 1.14
LMNA-204ENST00000368298 SEPT2Q15019 361 aa22.18■■□□□ 1.14
LMNA-204ENST00000368298 NBPF3Q9H094 633 aa22.18■■□□□ 1.14
LMNA-204ENST00000368298 ZCCHC17Q9NP64 241 aaKnown RBP22.18■■□□□ 1.14
LMNA-204ENST00000368298 SAGE1Q9NXZ1 904 aa22.18■■□□□ 1.14
LMNA-204ENST00000368298 TACC3Q9Y6A5 838 aa22.18■■□□□ 1.14
LMNA-204ENST00000368298 TRIM75PA6NK02 468 aa22.17■■□□□ 1.14
LMNA-204ENST00000368298 C19orf81C9J6K1 198 aa22.17■■□□□ 1.14
LMNA-204ENST00000368298 IGF2BP3O00425 579 aaKnown RBP eCLIP22.17■■□□□ 1.14
LMNA-204ENST00000368298 ZNF213O14771 459 aa22.17■■□□□ 1.14
LMNA-204ENST00000368298 RAB3GAP1Q15042 981 aa22.17■■□□□ 1.14
LMNA-204ENST00000368298 FASTKD5Q7L8L6 764 aaKnown RBP22.17■■□□□ 1.14
LMNA-204ENST00000368298 ZNF444Q8N0Y2 327 aaPredicted RBP22.17■■□□□ 1.14
LMNA-204ENST00000368298 BEGAINQ9BUH8 593 aa22.17■■□□□ 1.14
LMNA-204ENST00000368298 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.17■■□□□ 1.14
LMNA-204ENST00000368298 CFHR5Q9BXR6 569 aa22.17■■□□□ 1.14
LMNA-204ENST00000368298 RNF186Q9NXI6 227 aa22.17■■□□□ 1.14
LMNA-204ENST00000368298 USP17L10C9JJH3 530 aa22.16■■□□□ 1.14
LMNA-204ENST00000368298 MPHOSPH10O00566 681 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms