RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 A0A1W2PPZ6 126 aa10.8□□□□□ -0.68
YBX3-204ENST00000366290 ITPKAP23677 461 aa10.8□□□□□ -0.68
YBX3-204ENST00000366290 ZNF76P36508 570 aa10.8□□□□□ -0.68
YBX3-204ENST00000366290 BTBD6Q96KE9 485 aa10.8□□□□□ -0.68
YBX3-204ENST00000366290 PUS7Q96PZ0 661 aaKnown RBP10.8□□□□□ -0.68
YBX3-204ENST00000366290 TTF2Q9UNY4 1162 aaKnown RBP10.8□□□□□ -0.68
YBX3-204ENST00000366290 TRIM33Q9UPN9 1127 aa10.8□□□□□ -0.68
YBX3-204ENST00000366290 AKAP2Q9Y2D5 859 aa10.8□□□□□ -0.68
YBX3-204ENST00000366290 AKAP12Q02952 1782 aa10.8□□□□□ -0.68
YBX3-204ENST00000366290 USP6P35125 1406 aa10.79□□□□□ -0.68
YBX3-204ENST00000366290 ST13P50502 369 aaKnown RBP10.79□□□□□ -0.68
YBX3-204ENST00000366290 PTPN12Q05209 780 aaKnown RBP10.79□□□□□ -0.68
YBX3-204ENST00000366290 NUDT8Q8WV74 236 aa10.79□□□□□ -0.68
YBX3-204ENST00000366290 RNF34Q969K3 372 aa10.79□□□□□ -0.68
YBX3-204ENST00000366290 PPM1HQ9ULR3 514 aa10.79□□□□□ -0.68
YBX3-204ENST00000366290 COL14A1Q05707 1796 aaKnown RBP10.79□□□□□ -0.68
YBX3-204ENST00000366290 PHRF1Q9P1Y6 1649 aaKnown RBP10.79□□□□□ -0.68
YBX3-204ENST00000366290 NRAPQ86VF7 1730 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 CPSF1Q10570 1443 aaKnown RBP10.78□□□□□ -0.68
YBX3-204ENST00000366290 RGS9O75916 674 aaPredicted RBP10.78□□□□□ -0.68
YBX3-204ENST00000366290 DGKGP49619 791 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 C9orf131Q5VYM1 1079 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 ADAMTSL4Q6UY14 1074 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 LINC00114Q6XXX2 140 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 DEFB132Q7Z7B7 95 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 TTC9Q92623 222 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 TESK2Q96S53 571 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 USP19O94966 1318 aa10.78□□□□□ -0.68
YBX3-204ENST00000366290 FAM83GA6ND36 823 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 ALBP02768 609 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 PTPRAP18433 802 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 AMPD1P23109 780 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 VPS72Q15906 364 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 CHSY3Q70JA7 882 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 METTL16Q86W50 562 aaKnown RBP10.77□□□□□ -0.69
YBX3-204ENST00000366290 BSNDQ8WZ55 320 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 LACRTQ9GZZ8 138 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 MUC3BQ9H195 1237 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 ZNF576Q9H609 170 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 RRAGCQ9HB90 399 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 ZFYVE1Q9HBF4 777 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 MKL2Q9ULH7 1088 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 NRKQ7Z2Y5 1582 aa10.77□□□□□ -0.69
YBX3-204ENST00000366290 BLMP54132 1417 aaPredicted RBP10.76□□□□□ -0.69
YBX3-204ENST00000366290 MON2Q7Z3U7 1717 aa10.76□□□□□ -0.69
YBX3-204ENST00000366290 GDF6Q6KF10 455 aaPredicted RBP10.76□□□□□ -0.69
YBX3-204ENST00000366290 C20orf204Q6ZNR8 217 aa10.76□□□□□ -0.69
YBX3-204ENST00000366290 ANKRD24Q8TF21 1146 aa10.76□□□□□ -0.69
YBX3-204ENST00000366290 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
YBX3-204ENST00000366290 ADAM19Q9H013 955 aa10.76□□□□□ -0.69
YBX3-204ENST00000366290 JPH1Q9HDC5 661 aaPredicted RBP10.76□□□□□ -0.69
YBX3-204ENST00000366290 SOX13Q9UN79 622 aa10.76□□□□□ -0.69
YBX3-204ENST00000366290 CPDO75976 1380 aa10.76□□□□□ -0.69
YBX3-204ENST00000366290 PIK3C2AO00443 1686 aa10.76□□□□□ -0.69
YBX3-204ENST00000366290 CD163L1Q9NR16 1453 aa10.75□□□□□ -0.69
YBX3-204ENST00000366290 FBXO24O75426 580 aa10.75□□□□□ -0.69
YBX3-204ENST00000366290 USP54Q70EL1 1684 aa10.75□□□□□ -0.69
YBX3-204ENST00000366290 NINLQ9Y2I6 1382 aa10.75□□□□□ -0.69
YBX3-204ENST00000366290 SLIT3O75094 1523 aa10.74□□□□□ -0.69
YBX3-204ENST00000366290 ST20-MTHFSA0A0A6YYL1 179 aa10.74□□□□□ -0.69
YBX3-204ENST00000366290 COL8A1P27658 744 aa10.74□□□□□ -0.69
YBX3-204ENST00000366290 GRIK5Q16478 980 aa10.74□□□□□ -0.69
YBX3-204ENST00000366290 RPS26P11Q5JNZ5 115 aaPredicted RBP10.74□□□□□ -0.69
YBX3-204ENST00000366290 TPTE2Q6XPS3 522 aa10.74□□□□□ -0.69
YBX3-204ENST00000366290 NT5DC4Q86YG4 428 aa10.74□□□□□ -0.69
YBX3-204ENST00000366290 CLEC4MQ9H2X3 399 aaPredicted RBP10.74□□□□□ -0.69
YBX3-204ENST00000366290 USP47Q96K76 1375 aa10.74□□□□□ -0.69
YBX3-204ENST00000366290 LMO7Q8WWI1 1683 aa10.73□□□□□ -0.69
YBX3-204ENST00000366290 M0R082 166 aa10.73□□□□□ -0.69
YBX3-204ENST00000366290 ITGB2P05107 769 aa10.73□□□□□ -0.69
YBX3-204ENST00000366290 ERCC5P28715 1186 aaPredicted RBP10.73□□□□□ -0.69
YBX3-204ENST00000366290 HS2ST1Q7LGA3 356 aa10.73□□□□□ -0.69
YBX3-204ENST00000366290 VN1R5Q7Z5H4 357 aa10.73□□□□□ -0.69
YBX3-204ENST00000366290 ZNF417Q8TAU3 575 aa10.73□□□□□ -0.69
YBX3-204ENST00000366290 ZNF587Q96SQ5 575 aaPredicted RBP10.73□□□□□ -0.69
YBX3-204ENST00000366290 SH2B1Q9NRF2 756 aaPredicted RBP10.73□□□□□ -0.69
YBX3-204ENST00000366290 TTC21AQ8NDW8 1320 aa10.73□□□□□ -0.69
YBX3-204ENST00000366290 KIAA0232Q92628 1395 aa10.73□□□□□ -0.69
YBX3-204ENST00000366290 FAM177BA6PVY3 158 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 LILRB5O75023 590 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 GCP02774 474 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 CDC27P30260 824 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 FAAP100Q0VG06 881 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 CCDC85BQ15834 202 aaPredicted RBP10.72□□□□□ -0.69
YBX3-204ENST00000366290 CACTIN-AS1Q8N1I8 211 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 NOC4LQ9BVI4 516 aaKnown RBP10.72□□□□□ -0.69
YBX3-204ENST00000366290 CEP44Q9C0F1 390 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 PRDM11Q9NQV5 511 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 SEC31BQ9NQW1 1179 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 BTG4Q9NY30 223 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 GGT7Q9UJ14 662 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 TTC21BQ7Z4L5 1316 aa10.72□□□□□ -0.69
YBX3-204ENST00000366290 EPHA1P21709 976 aa10.71□□□□□ -0.69
YBX3-204ENST00000366290 AFF1P51825 1210 aaKnown RBP10.71□□□□□ -0.69
YBX3-204ENST00000366290 PCDH1Q08174 1060 aa10.71□□□□□ -0.69
YBX3-204ENST00000366290 RAD51AP2Q09MP3 1159 aa10.71□□□□□ -0.69
YBX3-204ENST00000366290 C8orf86Q6ZUL3 223 aa10.71□□□□□ -0.69
YBX3-204ENST00000366290 KRT27Q7Z3Y8 459 aa10.71□□□□□ -0.69
YBX3-204ENST00000366290 KTN1Q86UP2 1357 aaKnown RBP10.71□□□□□ -0.69
YBX3-204ENST00000366290 COL18A1P39060 1754 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms