RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 NEK11Q8NG66 645 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 VEZTQ9HBM0 779 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 EPB41L4AQ9HCS5 686 aaPredicted RBP10.49□□□□□ -0.73
CALD1-202ENST00000361901 CD209Q9NNX6 404 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 VPS54Q9P1Q0 977 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 BCL9LQ86UU0 1499 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 NRDCO43847 1150 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 GOLGA8HP0CJ92 632 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 SSR1P43307 286 aaKnown RBP10.49□□□□□ -0.73
CALD1-202ENST00000361901 MNAT1P51948 309 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 SOGA3Q5TF21 947 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 TMED8Q6PL24 325 aaPredicted RBP10.49□□□□□ -0.73
CALD1-202ENST00000361901 HEATR3Q7Z4Q2 680 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 ADGRA1Q86SQ6 560 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 COL23A1Q86Y22 540 aaPredicted RBP10.49□□□□□ -0.73
CALD1-202ENST00000361901 CCDC34Q96HJ3 373 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
CALD1-202ENST00000361901 YY1AP1Q9H869 796 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 HMGB2P26583 209 aaKnown RBP10.49□□□□□ -0.73
CALD1-202ENST00000361901 CASQ1P31415 396 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 ZNF397Q8NF99 534 aaPredicted RBP10.49□□□□□ -0.73
CALD1-202ENST00000361901 SH3RF3Q8TEJ3 882 aaPredicted RBP10.49□□□□□ -0.73
CALD1-202ENST00000361901 CABP5Q9NP86 173 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 COL18A1P39060 1754 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 SPTLC2O15270 562 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 ADRA2BP18089 450 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 BAG6P46379 1132 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 DHX8Q14562 1220 aaKnown RBP10.48□□□□□ -0.73
CALD1-202ENST00000361901 EZH2Q15910 746 aaKnown RBP10.48□□□□□ -0.73
CALD1-202ENST00000361901 GIMAP7Q8NHV1 300 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 TMOD2Q9NZR1 351 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 AFDNP55196 1824 aaKnown RBP10.48□□□□□ -0.73
CALD1-202ENST00000361901 COL14A1Q05707 1796 aaKnown RBP10.48□□□□□ -0.73
CALD1-202ENST00000361901 C5P01031 1676 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 A0A087WWV3 80 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 SLFN14P0C7P3 912 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 CCDC172P0C7W6 258 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 MB21D2Q8IYB1 491 aaPredicted RBP10.48□□□□□ -0.73
CALD1-202ENST00000361901 DIS3L2Q8IYB7 885 aaKnown RBP10.48□□□□□ -0.73
CALD1-202ENST00000361901 EYA3Q99504 573 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 USP40Q9NVE5 1235 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 PPIP5K2O43314 1243 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 DDIT3P35638 169 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 LMAN1P49257 510 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 ANKRD20A12PQ8NF67 263 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 JRKLQ9Y4A0 524 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 C21orf2O43822 256 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 CAPN2P17655 700 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 HSP90AA4PQ58FG1 418 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 FANCBQ8NB91 859 aa10.48□□□□□ -0.73
CALD1-202ENST00000361901 ZSCAN10Q96SZ4 725 aaPredicted RBP10.48□□□□□ -0.73
CALD1-202ENST00000361901 BTBD18B2RXH4 712 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 SH2B2O14492 632 aaPredicted RBP10.47□□□□□ -0.73
CALD1-202ENST00000361901 ZBTB7AO95365 584 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 KIF5BP33176 963 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 EXOSC10Q01780 885 aaKnown RBP10.47□□□□□ -0.73
CALD1-202ENST00000361901 LRCH2Q5VUJ6 765 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 CCAR2Q8N163 923 aaKnown RBP10.47□□□□□ -0.73
CALD1-202ENST00000361901 LARGE2Q8N3Y3 721 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 MNS1Q8NEH6 495 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 NSUN4Q96CB9 384 aaKnown RBP10.47□□□□□ -0.73
CALD1-202ENST00000361901 UIMC1Q96RL1 719 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 SEC63Q9UGP8 760 aaKnown RBP10.47□□□□□ -0.73
CALD1-202ENST00000361901 PLEKHG2Q9H7P9 1386 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 USP17L3A6NCW0 530 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 USP17L4A6NCW7 530 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 HLA-DOAP06340 250 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 IBSPP21815 317 aaPredicted RBP10.47□□□□□ -0.73
CALD1-202ENST00000361901 CDC27P30260 824 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 ANTXR2P58335 489 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 USP17L1Q7RTZ2 530 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 DNAJC25Q9H1X3 360 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 UBE2Q2LH0YL09 131 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 TSGA10IPQ3SY00 556 aa10.47□□□□□ -0.73
CALD1-202ENST00000361901 RIC1Q4ADV7 1423 aa10.46□□□□□ -0.73
CALD1-202ENST00000361901 NR1I2O75469 434 aa10.46□□□□□ -0.73
CALD1-202ENST00000361901 ANO6Q4KMQ2 910 aa10.46□□□□□ -0.73
CALD1-202ENST00000361901 FLAD1Q8NFF5 587 aa10.46□□□□□ -0.73
CALD1-202ENST00000361901 CPVLQ9H3G5 476 aa10.46□□□□□ -0.73
CALD1-202ENST00000361901 GPCPD1Q9NPB8 672 aa10.46□□□□□ -0.73
CALD1-202ENST00000361901 CCDC194A0A1B0GVG4 234 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 SMC2O95347 1197 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 RDXP35241 583 aaKnown RBP10.46□□□□□ -0.74
CALD1-202ENST00000361901 ZNF165P49910 485 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 DDR1Q08345 913 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 ST3GAL1Q11201 340 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 PPP2R5AQ15172 486 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 TMCO3Q6UWJ1 677 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 OGFOD1Q8N543 542 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 FBXO18Q8NFZ0 1043 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 PDLIM2Q96JY6 352 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 DCP1AQ9NPI6 582 aaPredicted RBP10.46□□□□□ -0.74
CALD1-202ENST00000361901 DDX19AQ9NUU7 478 aaKnown RBP10.46□□□□□ -0.74
CALD1-202ENST00000361901 CLIC4Q9Y696 253 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 RPAP1Q9BWH6 1393 aaPredicted RBP10.46□□□□□ -0.74
CALD1-202ENST00000361901 SLIT2O94813 1529 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 FBXO33Q7Z6M2 555 aa10.46□□□□□ -0.74
CALD1-202ENST00000361901 TBC1D16Q8TBP0 767 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms