RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 SASH1O94885 1247 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 UBE2HP62256 183 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 PABPC4Q13310 644 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCL28-201ENST00000361115 TIGD1Q96MW7 591 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 CRISPLD2Q9H0B8 497 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 NRBP1Q9UHY1 535 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 MAST2Q6P0Q8 1798 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 SALL1Q9NSC2 1324 aa9.03□□□□□ -0.96
CCL28-201ENST00000361115 SHTN1A0MZ66 631 aa9.02□□□□□ -0.96
CCL28-201ENST00000361115 EGFRP00533 1210 aa9.02□□□□□ -0.96
CCL28-201ENST00000361115 TNNT1P13805 278 aa9.02□□□□□ -0.96
CCL28-201ENST00000361115 C17orf99Q6UX52 265 aa9.02□□□□□ -0.96
CCL28-201ENST00000361115 CCDC186Q7Z3E2 898 aa9.02□□□□□ -0.96
CCL28-201ENST00000361115 MYPNQ86TC9 1320 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 CCDC66A2RUB6 948 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 STK25O00506 426 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 SLC4A8Q2Y0W8 1093 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 NBPF9Q3BBW0 867 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 CFAP100Q494V2 611 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 KMT5BQ4FZB7 885 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 KRT222Q8N1A0 295 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 TDRD7Q8NHU6 1098 aaKnown RBP9.02□□□□□ -0.97
CCL28-201ENST00000361115 MYD88Q99836 296 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 PNMA3Q9UL41 463 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 GOLGA6L6A8MZA4 724 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 APPP05067 770 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 PDE1AP54750 535 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 GCKRQ14397 625 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 DDX60LQ5H9U9 1706 aaKnown RBP9.02□□□□□ -0.97
CCL28-201ENST00000361115 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 TRERF1Q96PN7 1200 aa9.02□□□□□ -0.97
CCL28-201ENST00000361115 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.02□□□□□ -0.97
CCL28-201ENST00000361115 V9GYY5 206 aaPredicted RBP9.02□□□□□ -0.97
CCL28-201ENST00000361115 CCL15-CCL14A0A0B4J2E2 113 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 NEURL1BA8MQ27 555 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
CCL28-201ENST00000361115 CCL15Q16663 113 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 SYMPKQ92797 1274 aaKnown RBP9.01□□□□□ -0.97
CCL28-201ENST00000361115 OPTNQ96CV9 577 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 ZDHHC15Q96MV8 337 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 LARP6Q9BRS8 491 aaKnown RBP9.01□□□□□ -0.97
CCL28-201ENST00000361115 ANO2Q9NQ90 1003 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 ZNF70Q9UC06 446 aaPredicted RBP9.01□□□□□ -0.97
CCL28-201ENST00000361115 POTEFA5A3E0 1075 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 TULP2O00295 520 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 CASP7P55210 303 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 AIMP1Q12904 312 aaKnown RBP9.01□□□□□ -0.97
CCL28-201ENST00000361115 RPAP2Q8IXW5 612 aaPredicted RBP9.01□□□□□ -0.97
CCL28-201ENST00000361115 CCDC112Q8NEF3 446 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 FAM53CQ9NYF3 392 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 MIS18AQ9NYP9 233 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 UTYO14607 1347 aa9.01□□□□□ -0.97
CCL28-201ENST00000361115 MEIS3Q99687 375 aa9□□□□□ -0.97
CCL28-201ENST00000361115 GCLCP48506 637 aaPredicted RBP9□□□□□ -0.97
CCL28-201ENST00000361115 MAP3K10Q02779 954 aa9□□□□□ -0.97
CCL28-201ENST00000361115 LUZP1Q86V48 1076 aa9□□□□□ -0.97
CCL28-201ENST00000361115 COLQQ9Y215 455 aaPredicted RBP9□□□□□ -0.97
CCL28-201ENST00000361115 PTCH2Q9Y6C5 1203 aa9□□□□□ -0.97
CCL28-201ENST00000361115 SYT1P21579 422 aa9□□□□□ -0.97
CCL28-201ENST00000361115 GRK4P32298 578 aa9□□□□□ -0.97
CCL28-201ENST00000361115 SLC20A2Q08357 652 aa9□□□□□ -0.97
CCL28-201ENST00000361115 ZSCAN25Q6NSZ9 544 aa9□□□□□ -0.97
CCL28-201ENST00000361115 DNAJC2Q99543 621 aaKnown RBP9□□□□□ -0.97
CCL28-201ENST00000361115 IL25Q9H293 177 aa9□□□□□ -0.97
CCL28-201ENST00000361115 OSBPL3Q9H4L5 887 aa9□□□□□ -0.97
CCL28-201ENST00000361115 ANAPC15P60006 121 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 ZNF397Q8NF99 534 aaPredicted RBP8.99□□□□□ -0.97
CCL28-201ENST00000361115 BRI3BPQ8WY22 251 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 ZNF215Q9UL58 517 aaPredicted RBP8.99□□□□□ -0.97
CCL28-201ENST00000361115 STX6O43752 255 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 ENTPD3O75355 529 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 FARP2O94887 1054 aaPredicted RBP8.99□□□□□ -0.97
CCL28-201ENST00000361115 F13A1P00488 732 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 CHMLP26374 656 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 DNM1Q05193 864 aaKnown RBP8.99□□□□□ -0.97
CCL28-201ENST00000361115 CHRNDQ07001 517 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 IFIT5Q13325 482 aaKnown RBP8.99□□□□□ -0.97
CCL28-201ENST00000361115 FBXO38Q6PIJ6 1188 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 FAM151AQ8WW52 585 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 TEPSINQ96N21 525 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 SEC31BQ9NQW1 1179 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 MRVI1Q9Y6F6 885 aa8.99□□□□□ -0.97
CCL28-201ENST00000361115 TBC1D12O60347 775 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 SGPL1O95470 568 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 CCDC192P0DO97 292 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 BCRP11274 1271 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 ITGA6P23229 1130 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 TPD52L1Q16890 204 aaPredicted RBP8.98□□□□□ -0.97
CCL28-201ENST00000361115 DRC7Q8IY82 874 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 PROCA1Q8NCQ7 364 aaPredicted RBP8.98□□□□□ -0.97
CCL28-201ENST00000361115 WDR66Q8TBY9 1149 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 TEKT1Q969V4 418 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 CALCOCO1Q9P1Z2 691 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 PAXBP1Q9Y5B6 917 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 USP27XA6NNY8 438 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 TRIM6-TRIM34B2RNG4 842 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 RASA3Q14644 834 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 FAM200AQ8TCP9 573 aa8.98□□□□□ -0.97
CCL28-201ENST00000361115 CACTINQ8WUQ7 758 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms