RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RPS6KA2Q15349 733 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 SIRT1Q96EB6 747 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 SNAPC4Q5SXM2 1469 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 PLCD1P51178 756 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 RAB17Q9H0T7 212 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 RALGAPBQ86X10 1494 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 IFT88Q13099 833 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 NUP58Q9BVL2 599 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 PICK1Q9NRD5 415 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 CEP104O60308 925 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 RPGRIP1Q96KN7 1286 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 BCRP11274 1271 aa14.58□□□□□ -0.07
SRGAP3-201ENST00000360413 TTC19Q6DKK2 380 aaPredicted RBP14.58□□□□□ -0.07
SRGAP3-201ENST00000360413 TMTC1Q8IUR5 882 aa14.58□□□□□ -0.07
SRGAP3-201ENST00000360413 TSC22D3Q99576 134 aa14.58□□□□□ -0.07
SRGAP3-201ENST00000360413 BACH1O14867 736 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 KRT5P13647 590 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 ASIC2Q16515 512 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 NLRP3Q96P20 1036 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 DRC3Q9H069 523 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 PDE11AQ9HCR9 933 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 HOMER3Q9NSC5 361 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 YY1AP1Q9H869 796 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 EFCAB8A8MWE9 144 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 CCDC93Q567U6 631 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 ARHGEF10LQ9HCE6 1279 aa14.58□□□□□ -0.08
SRGAP3-201ENST00000360413 PHBP35232 272 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 NONOQ15233 471 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 ZNF449Q6P9G9 518 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 ANKRD2Q9GZV1 360 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 SAR1BQ9Y6B6 198 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 FAM212AQ96EL1 285 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 ZNF500O60304 480 aaPredicted RBP14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 HOXA7P31268 230 aaPredicted RBP14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 MAP3K7CLP57077 242 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 ESRRGP62508 458 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 PDZD4Q76G19 769 aaPredicted RBP14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 CCDC105Q8IYK2 499 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 SNRPA1P09661 255 aaKnown RBP14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 DNM2P50570 870 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 IWS1Q96ST2 819 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 BIN2Q9UBW5 565 aaPredicted RBP14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 ORC6Q9Y5N6 252 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 FBXO41Q8TF61 875 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 CENPKQ9BS16 269 aa14.57□□□□□ -0.08
SRGAP3-201ENST00000360413 NUDT16Q96DE0 195 aaKnown RBP14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 PLEKHA4Q9H4M7 779 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 CCDC92Q53HC0 331 aaPredicted RBP14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 CCDC13Q8IYE1 715 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 CLEC11AQ9Y240 323 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 MAST3O60307 1309 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 PDE1AP54750 535 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 MCMDC2Q4G0Z9 681 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 SNRKQ9NRH2 765 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 PNMA2Q9UL42 364 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 TNFAIP3P21580 790 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 AKNAD1Q5T1N1 836 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 IFNL2Q8IZJ0 200 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 TCP11Q8WWU5 503 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 MTX1Q13505 466 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 PRPF38AQ8NAV1 312 aaKnown RBP14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 USP6NLQ92738 828 aa14.56□□□□□ -0.08
SRGAP3-201ENST00000360413 KRT9P35527 623 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 BEND3Q5T5X7 828 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 NOP56O00567 594 aaKnown RBP14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 IVNS1ABPQ9Y6Y0 642 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 SLC9C1Q4G0N8 1177 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 PPP2R5CQ13362 524 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 PALMDQ9NP74 551 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 CREB3O43889 395 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 RPS6KA1Q15418 735 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 SV2BQ7L1I2 683 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 SLC24A3Q9HC58 644 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 EPS15L1Q9UBC2 864 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 IL16Q14005 1332 aa14.55□□□□□ -0.08
SRGAP3-201ENST00000360413 TYW5A2RUC4 315 aaKnown RBP14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 TAF11Q15544 211 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 NLRP7Q8WX94 980 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 NAIPQ13075 1403 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 TRAF5O00463 557 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 CHMP2AO43633 222 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 EVI5O60447 810 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 PCYT1AP49585 367 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 BIRC3Q13489 604 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 PLIN2Q99541 437 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 CLSTN2Q9H4D0 955 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 MAP3K2Q9Y2U5 619 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 PTPDC1A2A3K4 754 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 SYF2O95926 243 aaKnown RBP14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 POLR2BP30876 1174 aaKnown RBP14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 CASC4Q6P4E1 433 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 LZTS2Q9BRK4 669 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 FLOT1O75955 427 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 SUN1O94901 812 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 RAD51AP2Q09MP3 1159 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 NXNQ6DKJ4 435 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 CADPS2Q86UW7 1296 aa14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 ZNF215Q9UL58 517 aaPredicted RBP14.54□□□□□ -0.08
SRGAP3-201ENST00000360413 CCPG1Q9ULG6 757 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms