RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CTDNEP1O95476 244 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 EPHX2P34913 555 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 CRKP46108 304 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 GMPSP49915 693 aaPredicted RBP15.75■□□□□ 0.11
CCDC197-201ENST00000359253 IFFO2Q5TF58 517 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 CATIPQ7Z7H3 387 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 DGKHQ86XP1 1220 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 ZNF444Q8N0Y2 327 aaPredicted RBP15.75■□□□□ 0.11
CCDC197-201ENST00000359253 RBM46Q8TBY0 533 aaKnown RBP15.75■□□□□ 0.11
CCDC197-201ENST00000359253 WASF1Q92558 559 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 INCENPQ9NQS7 918 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 GPHNQ9NQX3 736 aaPredicted RBP15.75■□□□□ 0.11
CCDC197-201ENST00000359253 USP40Q9NVE5 1235 aa15.75■□□□□ 0.11
CCDC197-201ENST00000359253 RBM28Q9NW13 759 aaKnown RBP15.75■□□□□ 0.11
CCDC197-201ENST00000359253 TNKSO95271 1327 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 STK36Q9NRP7 1315 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 NAV1Q8NEY1 1877 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 SCN4AP35499 1836 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 VPS37CA5D8V6 355 aaPredicted RBP15.74■□□□□ 0.11
CCDC197-201ENST00000359253 TSPY2A6NKD2 308 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 GOLGA8AA7E2F4 631 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 TRAK2O60296 914 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 JAK2O60674 1132 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 DDAH1O94760 285 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 EPS15P42566 896 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 IFIT1BQ5T764 474 aaKnown RBP15.74■□□□□ 0.11
CCDC197-201ENST00000359253 ATL3Q6DD88 541 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 MCTP1Q6DN14 999 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 C16orf86Q6ZW13 317 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 MAPKAPK5Q8IW41 473 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 OGFOD1Q8N543 542 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 ZC3H15Q8WU90 426 aaKnown RBP15.74■□□□□ 0.11
CCDC197-201ENST00000359253 MAP3K14Q99558 947 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 SWAP70Q9UH65 585 aa15.74■□□□□ 0.11
CCDC197-201ENST00000359253 CYP2D7A0A087X1C5 515 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 IFNAR1P17181 557 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 ZNF280AP59817 542 aaPredicted RBP15.73■□□□□ 0.11
CCDC197-201ENST00000359253 FSTL1Q12841 308 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 PPP4R3BQ5MIZ7 849 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 APOBEC3HQ6NTF7 200 aaKnown RBP15.73■□□□□ 0.11
CCDC197-201ENST00000359253 ZNF654Q8IZM8 581 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 TMEM87AQ8NBN3 555 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 IDI2Q9BXS1 227 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 DHX36Q9H2U1 1008 aaKnown RBP15.73■□□□□ 0.11
CCDC197-201ENST00000359253 NCOA5Q9HCD5 579 aaKnown RBP15.73■□□□□ 0.11
CCDC197-201ENST00000359253 HDAC9Q9UKV0 1011 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
CCDC197-201ENST00000359253 FOCADQ5VW36 1801 aa15.73■□□□□ 0.11
CCDC197-201ENST00000359253 F8W031 263 aaPredicted RBP15.72■□□□□ 0.11
CCDC197-201ENST00000359253 HLA-DOAP06340 250 aa15.72■□□□□ 0.11
CCDC197-201ENST00000359253 CYP2D6P10635 497 aa15.72■□□□□ 0.11
CCDC197-201ENST00000359253 NCLP19338 710 aaKnown RBP15.72■□□□□ 0.11
CCDC197-201ENST00000359253 RTN1Q16799 776 aa15.72■□□□□ 0.11
CCDC197-201ENST00000359253 LDHDQ86WU2 507 aa15.72■□□□□ 0.11
CCDC197-201ENST00000359253 ENAHQ8N8S7 591 aaPredicted RBP15.72■□□□□ 0.11
CCDC197-201ENST00000359253 FANCBQ8NB91 859 aa15.72■□□□□ 0.11
CCDC197-201ENST00000359253 DDX11Q96FC9 970 aa15.72■□□□□ 0.11
CCDC197-201ENST00000359253 ORC3Q9UBD5 711 aaPredicted RBP15.72■□□□□ 0.11
CCDC197-201ENST00000359253 PGAP2Q9UHJ9 254 aa15.72■□□□□ 0.11
CCDC197-201ENST00000359253 PSME4Q14997 1843 aa15.72■□□□□ 0.11
CCDC197-201ENST00000359253 DDX60LQ5H9U9 1706 aaKnown RBP15.71■□□□□ 0.11
CCDC197-201ENST00000359253 WDHD1O75717 1129 aaPredicted RBP15.71■□□□□ 0.11
CCDC197-201ENST00000359253 MBD3O95983 291 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 CDK8P49336 464 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 TFAP4Q01664 338 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 SSRP1Q08945 709 aaKnown RBP15.71■□□□□ 0.11
CCDC197-201ENST00000359253 NTRK3Q16288 839 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 KLHL40Q2TBA0 621 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 CDC42EP5Q6NZY7 148 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 MICU3Q86XE3 530 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 MICALL2Q8IY33 904 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 TRIM22Q8IYM9 498 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 NKX2-3Q8TAU0 364 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 OSBPL5Q9H0X9 879 aaPredicted RBP15.71■□□□□ 0.11
CCDC197-201ENST00000359253 EHD4Q9H223 541 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 LMBRD1Q9NUN5 540 aa15.71■□□□□ 0.11
CCDC197-201ENST00000359253 CDK5RAP2Q96SN8 1893 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 PRDM1O75626 825 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 TSPY3P0CV98 308 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 TSPY8P0CW00 308 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 FDPSP14324 419 aaKnown RBP15.7■□□□□ 0.1
CCDC197-201ENST00000359253 ADD1P35611 737 aaKnown RBP15.7■□□□□ 0.1
CCDC197-201ENST00000359253 PLCD1P51178 756 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 KRT85P78386 507 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 STK11IPQ8N1F8 1099 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 SMC1BQ8NDV3 1235 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 NEDD1Q8NHV4 660 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 C8orf76Q96K31 380 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
CCDC197-201ENST00000359253 RBM27Q9P2N5 1060 aaKnown RBP15.7■□□□□ 0.1
CCDC197-201ENST00000359253 ZNF646O15015 1829 aaPredicted RBP15.7■□□□□ 0.1
CCDC197-201ENST00000359253 ENTPD3O75355 529 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 FMNL1O95466 1100 aaPredicted RBP15.69■□□□□ 0.1
CCDC197-201ENST00000359253 RASA1P20936 1047 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 KIF5BP33176 963 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 GNAQP50148 359 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 RBM5P52756 815 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC197-201ENST00000359253 GABPAQ06546 454 aa15.69■□□□□ 0.1
CCDC197-201ENST00000359253 FOXD4L5Q5VV16 416 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms