RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GMNNO75496 209 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 ADKP55263 362 aaKnown RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.23
CHD4-201ENST00000357008 HHATQ5VTY9 493 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 MIPOL1Q8TD10 442 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 DSCC1Q9BVC3 393 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 NSFL1CQ9UNZ2 370 aaKnown RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 KRT71Q3SY84 523 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 VPS52Q8N1B4 723 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 IP6K1Q92551 441 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 ZNF215Q9UL58 517 aaPredicted RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 SMTNP53814 917 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 PEX26Q7Z412 305 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 DDX41Q9UJV9 622 aaKnown RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
CHD4-201ENST00000357008 TSC1Q92574 1164 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 A2MP01023 1474 aa16.5■□□□□ 0.23
CHD4-201ENST00000357008 OR8K1Q8NGG5 319 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 ITGA6P23229 1130 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 PPM1FP49593 454 aaPredicted RBP16.49■□□□□ 0.23
CHD4-201ENST00000357008 PNOCQ13519 176 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 HERC4Q5GLZ8 1057 aaPredicted RBP16.49■□□□□ 0.23
CHD4-201ENST00000357008 TRIM58Q8NG06 486 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 VCXQ9H320 206 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 BACH1O14867 736 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 CCDC38Q502W7 563 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 SNX29Q8TEQ0 813 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 RAB17Q9H0T7 212 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 ODF2LQ9ULJ1 636 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 SNX16P57768 344 aa16.49■□□□□ 0.23
CHD4-201ENST00000357008 USP19O94966 1318 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 LRRC8AQ8IWT6 810 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 TEX11Q8IYF3 940 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 RPUSD2Q8IZ73 545 aaKnown RBP16.48■□□□□ 0.23
CHD4-201ENST00000357008 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 RAPGEF6Q8TEU7 1601 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 PFKFB1P16118 471 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 PARP2Q9UGN5 583 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 E7EWF7 191 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 NR1I2O75469 434 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 NBPF14Q5TI25 921 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 SDCCAG8Q86SQ7 713 aaPredicted RBP16.48■□□□□ 0.23
CHD4-201ENST00000357008 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 GPCPD1Q9NPB8 672 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 EXOC7Q9UPT5 735 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 SPATS2Q86XZ4 545 aaKnown RBP16.48■□□□□ 0.23
CHD4-201ENST00000357008 MRRFQ96E11 262 aaKnown RBP16.48■□□□□ 0.23
CHD4-201ENST00000357008 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
CHD4-201ENST00000357008 PPP2R2CQ9Y2T4 447 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 GAS8O95995 478 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 DENND2CQ68D51 928 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 CCDC105Q8IYK2 499 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 SUCLG2Q96I99 432 aa16.48■□□□□ 0.23
CHD4-201ENST00000357008 IBTKQ9P2D0 1353 aaPredicted RBP16.48■□□□□ 0.23
CHD4-201ENST00000357008 GOLGA8KD6RF30 607 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 LRMPQ12912 555 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 PPP1R21Q6ZMI0 780 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 MYL10Q9BUA6 226 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 MTMR6Q9Y217 621 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 GCP02774 474 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 MAP2K2P36507 400 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 TYW1BQ6NUM6 668 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 BAIAP2L1Q9UHR4 511 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 SYCP2Q9BX26 1530 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 GNGT1P63211 74 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 RRAGAQ7L523 313 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 CABP7Q86V35 215 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 KIFC2Q96AC6 838 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 RNF40O75150 1001 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 GSPT1P15170 499 aaKnown RBP16.47■□□□□ 0.23
CHD4-201ENST00000357008 ATP5JP18859 108 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 MAIP1Q8WWC4 291 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
CHD4-201ENST00000357008 KIF3CO14782 793 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 RASSF2P50749 326 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 LGSNQ5TDP6 509 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 HGSO14964 777 aaPredicted RBP16.46■□□□□ 0.23
CHD4-201ENST00000357008 SARNPP82979 210 aaKnown RBP16.46■□□□□ 0.23
CHD4-201ENST00000357008 ITIH3Q06033 890 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 PHLDB2Q86SQ0 1253 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 GPT2Q8TD30 523 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 MED4Q9NPJ6 270 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 TRPM2O94759 1503 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 BCRP11274 1271 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 DYMQ7RTS9 669 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 GDAP1L1Q96MZ0 367 aa16.46■□□□□ 0.23
CHD4-201ENST00000357008 FAM207AQ9NSI2 230 aaPredicted RBP16.46■□□□□ 0.23
CHD4-201ENST00000357008 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.22
CHD4-201ENST00000357008 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.22
CHD4-201ENST00000357008 PRDM1O75626 825 aa16.46■□□□□ 0.22
CHD4-201ENST00000357008 C2CD5Q86YS7 1000 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms