RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ZBTB43O43298 467 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 MBD4O95243 580 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 YEATS4O95619 227 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 CSF1RP07333 972 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 PPARDQ03181 441 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 CPLX2Q6PUV4 134 aaKnown RBP10.67□□□□□ -0.7
SMG6-202ENST00000354901 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 MIGA1Q8NAN2 632 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 CNNM3Q8NE01 707 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMG6-202ENST00000354901 NAPBQ9H115 298 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 TOGARAM1Q9Y4F4 1720 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 A0A1W2PQ27 194 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 A0A1W2PQ64 194 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 A0A1W2PQD8 194 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 CDC25BP30305 580 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 IARSP41252 1262 aaKnown RBP10.67□□□□□ -0.7
SMG6-202ENST00000354901 TRIM29Q14134 588 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 TTC19Q6DKK2 380 aaPredicted RBP10.67□□□□□ -0.7
SMG6-202ENST00000354901 NBPF11Q86T75 865 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 PLCD4Q9BRC7 762 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 L2HGDHQ9H9P8 463 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 KCNJ14Q9UNX9 436 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 ERLIN2O94905 339 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 PDE8BO95263 885 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 SATB1Q01826 763 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 NUP133Q8WUM0 1156 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 SEC31BQ9NQW1 1179 aa10.67□□□□□ -0.7
SMG6-202ENST00000354901 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
SMG6-202ENST00000354901 SLC4A9Q96Q91 983 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 FOXN1O15353 648 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 SERPINC1P01008 464 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 TADA2BQ86TJ2 420 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 DZIP3Q86Y13 1208 aaKnown RBP10.66□□□□□ -0.7
SMG6-202ENST00000354901 RNF217Q8TC41 542 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 RIC1Q4ADV7 1423 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 ZMYM6O95789 1325 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 GUCY1A2P33402 732 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 SETQ01105 290 aaPredicted RBP10.66□□□□□ -0.7
SMG6-202ENST00000354901 SLC39A14Q15043 492 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 JAKMIP3Q5VZ66 844 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 ARMCX5Q6P1M9 558 aa10.66□□□□□ -0.7
SMG6-202ENST00000354901 TJP1Q07157 1748 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 hCG_1642624A0A1W2PR95 340 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 BTBD18B2RXH4 712 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
SMG6-202ENST00000354901 CMA1P23946 247 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 GSDMDP57764 484 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 NLRP12P59046 1061 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 TRIM28Q13263 835 aaKnown RBP10.65□□□□□ -0.7
SMG6-202ENST00000354901 CFAP100Q494V2 611 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 SHC4Q6S5L8 630 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 GBP6Q6ZN66 633 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 MPHOSPH8Q99549 860 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 ZSWIM5Q9P217 1185 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 FANCCQ00597 558 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 RASGRF1Q13972 1273 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 KIRREL3Q8IZU9 778 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 DPF2Q92785 391 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 FUT8Q9BYC5 575 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 EPB41L4AQ9HCS5 686 aaPredicted RBP10.65□□□□□ -0.7
SMG6-202ENST00000354901 ABCF2Q9UG63 623 aa10.65□□□□□ -0.7
SMG6-202ENST00000354901 MINDY4BA8MYZ0 360 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 SMIM22K7EJ46 135 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 TPM1P09493 284 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 CCT5P48643 541 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 BCAMP50895 628 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 CORO7P57737 925 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 TTF1Q15361 905 aaPredicted RBP10.64□□□□□ -0.71
SMG6-202ENST00000354901 ZNF827Q17R98 1081 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 EGFL6Q8IUX8 553 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 IFNL3Q8IZI9 196 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 CCDC12Q8WUD4 166 aaPredicted RBP10.64□□□□□ -0.71
SMG6-202ENST00000354901 STRBPQ96SI9 672 aaKnown RBP10.64□□□□□ -0.71
SMG6-202ENST00000354901 ITGB4P16144 1822 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 NUP188Q5SRE5 1749 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 EFCAB8A8MWE9 144 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 CDKL5O76039 1030 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 GRIN1Q05586 938 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 LONRF3Q496Y0 759 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 SPATA5Q8NB90 893 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 DESI2Q9BSY9 194 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 FAM204AQ9H8W3 233 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 CICQ96RK0 1608 aaPredicted RBP10.64□□□□□ -0.71
SMG6-202ENST00000354901 PDE8AO60658 829 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 TFRCP02786 760 aaKnown RBP10.64□□□□□ -0.71
SMG6-202ENST00000354901 IGDCC4Q8TDY8 1250 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 CALR3Q96L12 384 aaKnown RBP10.64□□□□□ -0.71
SMG6-202ENST00000354901 WDR24Q96S15 920 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 HINFPQ9BQA5 517 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 LY9Q9HBG7 655 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 FBXO3Q9UK99 471 aa10.64□□□□□ -0.71
SMG6-202ENST00000354901 UBN2Q6ZU65 1347 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 EIF3JO75822 258 aaKnown RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 RDXP35241 583 aaKnown RBP10.63□□□□□ -0.71
SMG6-202ENST00000354901 UBASH3AP57075 661 aa10.63□□□□□ -0.71
SMG6-202ENST00000354901 SSRP1Q08945 709 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms