RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PROCA1Q8NCQ7 364 aaPredicted RBP13.9□□□□□ -0.18
CDRT1-202ENST00000354433 SH3TC2Q8TF17 1288 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 EDC3Q96F86 508 aaKnown RBP13.9□□□□□ -0.18
CDRT1-202ENST00000354433 TRIM47Q96LD4 638 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 SLC45A1Q9Y2W3 748 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 BRCA2P51587 3418 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 MYPNQ86TC9 1320 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 MYO5AQ9Y4I1 1855 aaKnown RBP13.89□□□□□ -0.19
CDRT1-202ENST00000354433 BCRP11274 1271 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 OSBPP22059 807 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 PRMT2P55345 433 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 PABPC4Q13310 644 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDRT1-202ENST00000354433 MTMR2Q13614 643 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 ANKRD45Q5TZF3 282 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 ZNF333Q96JL9 665 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 CRNKL1Q9BZJ0 848 aaKnown RBP13.89□□□□□ -0.19
CDRT1-202ENST00000354433 PAG1Q9NWQ8 432 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 TMOD4Q9NZQ9 345 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 SRRDQ9UH36 339 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 ZBTB21Q9ULJ3 1066 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 ZNF532Q9HCE3 1301 aa13.89□□□□□ -0.19
CDRT1-202ENST00000354433 SMARCA5O60264 1052 aaPredicted RBP13.88□□□□□ -0.19
CDRT1-202ENST00000354433 POLR3DP05423 398 aaPredicted RBP13.88□□□□□ -0.19
CDRT1-202ENST00000354433 CTGFP29279 349 aa13.88□□□□□ -0.19
CDRT1-202ENST00000354433 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
CDRT1-202ENST00000354433 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
CDRT1-202ENST00000354433 RIOK1Q9BRS2 568 aaKnown RBP13.88□□□□□ -0.19
CDRT1-202ENST00000354433 SERPINB13Q9UIV8 391 aa13.88□□□□□ -0.19
CDRT1-202ENST00000354433 SIPA1L1O43166 1804 aa13.88□□□□□ -0.19
CDRT1-202ENST00000354433 TNPO2O14787 897 aaKnown RBP13.88□□□□□ -0.19
CDRT1-202ENST00000354433 PRKCZQ05513 592 aa13.88□□□□□ -0.19
CDRT1-202ENST00000354433 SHROOM1Q2M3G4 852 aaPredicted RBP13.88□□□□□ -0.19
CDRT1-202ENST00000354433 LNPKQ9C0E8 428 aa13.88□□□□□ -0.19
CDRT1-202ENST00000354433 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDRT1-202ENST00000354433 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
CDRT1-202ENST00000354433 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
CDRT1-202ENST00000354433 ATAD5Q96QE3 1844 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 FOCADQ5VW36 1801 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 GH2P01242 217 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 ATP5JP18859 108 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 BACE1P56817 501 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
CDRT1-202ENST00000354433 METTL16Q86W50 562 aaKnown RBP13.87□□□□□ -0.19
CDRT1-202ENST00000354433 SDR42E1Q8WUS8 393 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 FEZ1Q99689 392 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 MCM9Q9NXL9 1143 aa13.87□□□□□ -0.19
CDRT1-202ENST00000354433 BIN2Q9UBW5 565 aaPredicted RBP13.87□□□□□ -0.19
CDRT1-202ENST00000354433 PTPRFP10586 1907 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 USP17L10C9JJH3 530 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 ANP32AP39687 249 aaKnown RBP13.86□□□□□ -0.19
CDRT1-202ENST00000354433 RAB3GAP1Q15042 981 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 LCORLQ8N3X6 602 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 GPATCH3Q96I76 525 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 WDR18Q9BV38 432 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 EHD4Q9H223 541 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 CDK5RAP2Q96SN8 1893 aa13.86□□□□□ -0.19
CDRT1-202ENST00000354433 EN2P19622 333 aaPredicted RBP13.85□□□□□ -0.19
CDRT1-202ENST00000354433 GRK4P32298 578 aa13.85□□□□□ -0.19
CDRT1-202ENST00000354433 JAG1P78504 1218 aa13.85□□□□□ -0.19
CDRT1-202ENST00000354433 ZYXQ15942 572 aaKnown RBP13.85□□□□□ -0.19
CDRT1-202ENST00000354433 FAM110CQ1W6H9 321 aa13.85□□□□□ -0.19
CDRT1-202ENST00000354433 CERKLQ49MI3 558 aaPredicted RBP13.85□□□□□ -0.19
CDRT1-202ENST00000354433 HAUS7Q99871 368 aa13.85□□□□□ -0.19
CDRT1-202ENST00000354433 ASCC2Q9H1I8 757 aaPredicted RBP13.85□□□□□ -0.19
CDRT1-202ENST00000354433 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
CDRT1-202ENST00000354433 CABP5Q9NP86 173 aa13.85□□□□□ -0.19
CDRT1-202ENST00000354433 LOC285556D6RIA3 1793 aa13.85□□□□□ -0.19
CDRT1-202ENST00000354433 C19orf81C9J6K1 198 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 MBD4O95243 580 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 ADD2P35612 726 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 GCLCP48506 637 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-202ENST00000354433 PLCD1P51178 756 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 ABCB5Q2M3G0 1257 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 BMP2KLQ5H9B9 411 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 COA7Q96BR5 231 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 ECHDC1Q9NTX5 307 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 NAV1Q8NEY1 1877 aa13.84□□□□□ -0.19
CDRT1-202ENST00000354433 TCRBV5S4A2TA0A5A2 114 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 MPHOSPH10O00566 681 aaKnown RBP13.83□□□□□ -0.19
CDRT1-202ENST00000354433 FLT3LGP49771 235 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 UBXN2AP68543 259 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 SLFNL1Q499Z3 407 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 TATDN1Q6P1N9 297 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 AMOTL1Q8IY63 956 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 DDRGK1Q96HY6 314 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 DCP1AQ9NPI6 582 aaPredicted RBP13.83□□□□□ -0.19
CDRT1-202ENST00000354433 GABRQQ9UN88 632 aa13.83□□□□□ -0.19
CDRT1-202ENST00000354433 MYH1P12882 1939 aa13.83□□□□□ -0.2
CDRT1-202ENST00000354433 MTFR1Q15390 333 aa13.83□□□□□ -0.2
CDRT1-202ENST00000354433 PRPF38BQ5VTL8 546 aaKnown RBP13.83□□□□□ -0.2
CDRT1-202ENST00000354433 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
CDRT1-202ENST00000354433 ZSCAN25Q6NSZ9 544 aa13.83□□□□□ -0.2
CDRT1-202ENST00000354433 CHGBP05060 677 aa13.82□□□□□ -0.2
CDRT1-202ENST00000354433 SHMT1P34896 483 aa13.82□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L2Q6R6M4 530 aa13.82□□□□□ -0.2
CDRT1-202ENST00000354433 DDX60LQ5H9U9 1706 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms