RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 SENP2Q9HC62 589 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 TUBBP07437 444 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 CARD10Q9BWT7 1032 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 CAPS2Q9BXY5 557 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 PDE2AO00408 941 aaPredicted RBP16.14■□□□□ 0.17
RLIM-202ENST00000349225 KIF1CO43896 1103 aaKnown RBP16.14■□□□□ 0.17
RLIM-202ENST00000349225 PLCD1P51178 756 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 GNGT1P63211 74 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 ANKRD24Q8TF21 1146 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 ZNF622Q969S3 477 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■□□ 14.9
RLIM-202ENST00000349225 CHP1Q99653 195 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 POLD4Q9HCU8 107 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 RGPD2P0DJD1 1756 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 MYO5AQ9Y4I1 1855 aaKnown RBP16.14■□□□□ 0.17
RLIM-202ENST00000349225 ZMYM6O95789 1325 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 CPLX1O14810 134 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 TOB1P50616 345 aaPredicted RBP16.14■□□□□ 0.17
RLIM-202ENST00000349225 SMYD4Q8IYR2 804 aaPredicted RBP16.14■□□□□ 0.17
RLIM-202ENST00000349225 SPATA20Q8TB22 786 aa16.14■□□□□ 0.17
RLIM-202ENST00000349225 ZKSCAN4Q969J2 545 aaPredicted RBP16.14■□□□□ 0.17
RLIM-202ENST00000349225 HOOK1Q9UJC3 728 aaKnown RBP16.14■□□□□ 0.17
RLIM-202ENST00000349225 PXDNQ92626 1479 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 CDKAL1Q5VV42 579 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 CCNI2Q6ZMN8 369 aaPredicted RBP16.13■□□□□ 0.17
RLIM-202ENST00000349225 CAPZA3Q96KX2 299 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 ABHD10Q9NUJ1 306 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 ZNF185O15231 689 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 DPYDQ12882 1025 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 PPFIA1Q13136 1202 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 CUL4BQ13620 913 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 LMO7Q8WWI1 1683 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 ACTN4O43707 911 aaKnown RBP16.13■□□□□ 0.17
RLIM-202ENST00000349225 KLHL10Q6JEL2 608 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 WWC3Q9ULE0 1092 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 GUCA1BQ9UMX6 200 aa16.13■□□□□ 0.17
RLIM-202ENST00000349225 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
RLIM-202ENST00000349225 TIMM10P62072 90 aa16.12■□□□□ 0.17
RLIM-202ENST00000349225 ELOA2Q8IYF1 753 aaPredicted RBP16.12■□□□□ 0.17
RLIM-202ENST00000349225 JMYQ8N9B5 988 aa16.12■□□□□ 0.17
RLIM-202ENST00000349225 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
RLIM-202ENST00000349225 C21orf2O43822 256 aa16.12■□□□□ 0.17
RLIM-202ENST00000349225 DDR1Q08345 913 aa16.12■□□□□ 0.17
RLIM-202ENST00000349225 FBXO2Q9UK22 296 aaPredicted RBP16.12■□□□□ 0.17
RLIM-202ENST00000349225 EZH2Q15910 746 aaKnown RBP16.11■□□□□ 0.17
RLIM-202ENST00000349225 HSP90AB3PQ58FF7 597 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 TTMPQ5BVD1 217 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 HDAC7Q8WUI4 952 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 ARL8AQ96BM9 186 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 CABS1Q96KC9 395 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 A0A087X0B3 334 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
RLIM-202ENST00000349225 FGAP02671 866 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 CCT6AP40227 531 aaKnown RBP16.11■□□□□ 0.17
RLIM-202ENST00000349225 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 KRI1Q8N9T8 703 aaKnown RBP16.11■□□□□ 0.17
RLIM-202ENST00000349225 AENQ8WTP8 325 aaKnown RBP16.11■□□□□ 0.17
RLIM-202ENST00000349225 MCM8Q9UJA3 840 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 GOLGA6BA6NDN3 693 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 MYD88Q99836 296 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 CRACR2AQ9BSW2 395 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 GNL3LQ9NVN8 582 aaKnown RBP16.11■□□□□ 0.17
RLIM-202ENST00000349225 MYO1AQ9UBC5 1043 aa16.11■□□□□ 0.17
RLIM-202ENST00000349225 PSMD14O00487 310 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 MRPS25P82663 173 aaKnown RBP16.1■□□□□ 0.17
RLIM-202ENST00000349225 RIC3Q7Z5B4 369 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 ADAMTS13Q76LX8 1427 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 TARSL2A2RTX5 802 aaKnown RBP16.1■□□□□ 0.17
RLIM-202ENST00000349225 FSBPO95073 299 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 ERCC5P28715 1186 aaPredicted RBP16.1■□□□□ 0.17
RLIM-202ENST00000349225 PDCLQ13371 301 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 SPATA1Q5VX52 437 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 CNGA4Q8IV77 575 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
RLIM-202ENST00000349225 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
RLIM-202ENST00000349225 OVOS2A0A0G2JMS6 1433 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 MST1RQ04912 1400 aa16.1■□□□□ 0.17
RLIM-202ENST00000349225 RNF113AO15541 343 aaKnown RBP16.09■□□□□ 0.17
RLIM-202ENST00000349225 HERVK_113P62684 666 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 MAP9Q49MG5 647 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 GBP6Q6ZN66 633 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 USP54Q70EL1 1684 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 TSEN2Q8NCE0 465 aaKnown RBP16.09■□□□□ 0.17
RLIM-202ENST00000349225 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 MYL6BP14649 208 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 ATP2B2Q01814 1243 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 C2orf54Q08AI8 447 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 NTRK3Q16288 839 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 RABL6Q3YEC7 729 aaPredicted RBP16.09■□□□□ 0.17
RLIM-202ENST00000349225 TMTC1Q8IUR5 882 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 FAXDC2Q96IV6 333 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 NEUROD6Q96NK8 337 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 PAPD7Q5XG87 772 aaKnown RBP16.09■□□□□ 0.17
RLIM-202ENST00000349225 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
RLIM-202ENST00000349225 FAM217BQ9NTX9 383 aaPredicted RBP16.09■□□□□ 0.17
RLIM-202ENST00000349225 CPDO75976 1380 aa16.08■□□□□ 0.17
RLIM-202ENST00000349225 RCCD1A6NED2 376 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
RLIM-202ENST00000349225 ECM2O94769 699 aaPredicted RBP16.08■□□□□ 0.16
RLIM-202ENST00000349225 PTPREP23469 700 aa16.08■□□□□ 0.16
RLIM-202ENST00000349225 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms