RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MORC3Q14149 939 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 RILPL1Q5EBL4 403 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 WASF1Q92558 559 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 NACAP1Q9BZK3 213 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 FAM53CQ9NYF3 392 aa20.71■□□□□ 0.91
PTP4A3-202ENST00000349124 ERICH2A1L162 156 aa20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 ERVV-1B6SEH8 477 aa20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 TEX33O43247 280 aa20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 DEXIO95424 95 aa20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 PPARAQ07869 468 aa20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 SART3Q15020 963 aaKnown RBP20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 SMYD4Q8IYR2 804 aaPredicted RBP20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 STAMQ92783 540 aa20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 IRX2Q9BZI1 471 aaPredicted RBP20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 PARP3Q9Y6F1 533 aa20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 ZNF335Q9H4Z2 1342 aaPredicted RBP20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 SRPRBQ9Y5M8 271 aaKnown RBP20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 BCL9O00512 1426 aa20.7■□□□□ 0.9
PTP4A3-202ENST00000349124 A0A0U1RQJ8 604 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 IL6STP40189 918 aaPredicted RBP20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 ATRIPQ8WXE1 791 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 GYG1P46976 350 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 V9GY48 417 aaPredicted RBP20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 TNKSO95271 1327 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 CD44P16070 742 aaKnown RBP20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 GNG11P61952 73 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 CHRNDQ07001 517 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 CPLX3Q8WVH0 158 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 UBXN4Q92575 508 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 FHOD1Q9Y613 1164 aa20.69■□□□□ 0.9
PTP4A3-202ENST00000349124 PLEKHA8P1O95397 391 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 DYNLL1P63167 89 aaKnown RBP20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 KARSQ15046 597 aaKnown RBP20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 PKN1Q16512 942 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 NT5DC1Q5TFE4 455 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 SPECC1LQ69YQ0 1117 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 INTS5Q6P9B9 1019 aaKnown RBP20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 ENOX1Q8TC92 643 aaKnown RBP20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 PHLPP2Q6ZVD8 1323 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 ARHGAP6O43182 974 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 EIF5P55010 431 aaKnown RBP20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 TERF2Q15554 542 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 MLKLQ8NB16 471 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 ACSBG1Q96GR2 724 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 RAI14Q9P0K7 980 aa20.68■□□□□ 0.9
PTP4A3-202ENST00000349124 SEC31AO94979 1220 aaKnown RBP20.67■□□□□ 0.9
PTP4A3-202ENST00000349124 SEC23AQ15436 765 aa20.67■□□□□ 0.9
PTP4A3-202ENST00000349124 MNS1Q8NEH6 495 aa20.67■□□□□ 0.9
PTP4A3-202ENST00000349124 EXOC5O00471 708 aa20.67■□□□□ 0.9
PTP4A3-202ENST00000349124 ZNF174Q15697 407 aa20.67■□□□□ 0.9
PTP4A3-202ENST00000349124 HOOK1Q9UJC3 728 aaKnown RBP20.67■□□□□ 0.9
PTP4A3-202ENST00000349124 KIF20AO95235 890 aa20.66■□□□□ 0.9
PTP4A3-202ENST00000349124 ENAHQ8N8S7 591 aaPredicted RBP20.66■□□□□ 0.9
PTP4A3-202ENST00000349124 PNPLA7Q6ZV29 1317 aa20.66■□□□□ 0.9
PTP4A3-202ENST00000349124 TADA3O75528 432 aa20.66■□□□□ 0.9
PTP4A3-202ENST00000349124 VEGFAP15692 232 aaPredicted RBP20.66■□□□□ 0.9
PTP4A3-202ENST00000349124 NR1I3Q14994 352 aa20.66■□□□□ 0.9
PTP4A3-202ENST00000349124 ADAMTS3O15072 1205 aa20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 GNAT2P19087 354 aa20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 IGHMBP2P38935 993 aaKnown RBP20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 GABPB1Q06547 395 aaPredicted RBP20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 DHX8Q14562 1220 aaKnown RBP20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 NIP7Q9Y221 180 aaKnown RBP eCLIP20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 CCDC196A0A1B0GTZ2 297 aa20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 SOWAHDA6NJG2 315 aa20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 CCP110O43303 1012 aa20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 ZSCAN12O43309 604 aa20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 MRPL44Q9H9J2 332 aaKnown RBP20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 LRP6O75581 1613 aa20.65■□□□□ 0.9
PTP4A3-202ENST00000349124 NMT2O60551 498 aa20.64■□□□□ 0.9
PTP4A3-202ENST00000349124 CRKLP46109 303 aaKnown RBP20.64■□□□□ 0.9
PTP4A3-202ENST00000349124 C3orf67Q6ZVT6 689 aa20.64■□□□□ 0.9
PTP4A3-202ENST00000349124 ZNF579Q8NAF0 562 aaKnown RBP20.64■□□□□ 0.9
PTP4A3-202ENST00000349124 SPATA20Q8TB22 786 aa20.64■□□□□ 0.9
PTP4A3-202ENST00000349124 SYMPKQ92797 1274 aaKnown RBP20.64■□□□□ 0.9
PTP4A3-202ENST00000349124 TRIM75PA6NK02 468 aa20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 PNMA6AP0CW24 399 aaPredicted RBP20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 FUT2Q10981 343 aa20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 SMIM5Q71RC9 77 aa20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 APTXQ7Z2E3 356 aaKnown RBP20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 NUTM2AQ8IVF1 878 aaPredicted RBP20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 ELOA2Q8IYF1 753 aaPredicted RBP20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 TMTC2Q8N394 836 aa20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 ZBTB9Q96C00 473 aa20.64■□□□□ 0.89
PTP4A3-202ENST00000349124 BAZ2BQ9UIF8 2168 aaKnown RBP20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 MAGEB6P1A0A0J9YX57 407 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 STX10O60499 249 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 CASQ1P31415 396 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 AKAP17AQ02040 695 aaKnown RBP20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 PAGE5Q96GU1 130 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 ATP6V1AP38606 617 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 PLA2G4AP47712 749 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 PLCD1P51178 756 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 BMS1Q14692 1282 aaKnown RBP20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 ZNF384Q8TF68 577 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 ESR2Q92731 530 aa20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 RNF41Q9H4P4 317 aaPredicted RBP20.63■□□□□ 0.89
PTP4A3-202ENST00000349124 ZSWIM4Q9H7M6 989 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms