RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ZGPATQ8N5A5 531 aaKnown RBP11.87□□□□□ -0.51
MRPL55-204ENST00000348259 DEFB123Q8N688 67 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 ZNF280CQ8ND82 737 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 ASCC2Q9H1I8 757 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-204ENST00000348259 DCTPP1Q9H773 170 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 CEP126Q9P2H0 1117 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-204ENST00000348259 FAM196BA6NMK8 535 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 HMMRO75330 724 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 MAP4K4O95819 1239 aaPredicted RBP11.86□□□□□ -0.51
MRPL55-204ENST00000348259 CAP2P40123 477 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 MECOMQ03112 1051 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 SPP2Q13103 211 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 LHX8Q68G74 356 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
MRPL55-204ENST00000348259 SIL1Q9H173 461 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 C11orf49Q9H6J7 331 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 HMX1Q9NP08 348 aaPredicted RBP11.86□□□□□ -0.51
MRPL55-204ENST00000348259 PA2G4Q9UQ80 394 aaKnown RBP11.86□□□□□ -0.51
MRPL55-204ENST00000348259 RLFQ13129 1914 aa11.86□□□□□ -0.51
MRPL55-204ENST00000348259 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
MRPL55-204ENST00000348259 SYN1P17600 705 aa11.85□□□□□ -0.51
MRPL55-204ENST00000348259 HOXA7P31268 230 aaPredicted RBP11.85□□□□□ -0.51
MRPL55-204ENST00000348259 HMGCS2P54868 508 aa11.85□□□□□ -0.51
MRPL55-204ENST00000348259 JAG1P78504 1218 aa11.85□□□□□ -0.51
MRPL55-204ENST00000348259 PICALMQ13492 652 aa11.85□□□□□ -0.51
MRPL55-204ENST00000348259 NSUN4Q96CB9 384 aaKnown RBP11.85□□□□□ -0.51
MRPL55-204ENST00000348259 WDR18Q9BV38 432 aa11.85□□□□□ -0.51
MRPL55-204ENST00000348259 DNAJC18Q9H819 358 aa11.85□□□□□ -0.51
MRPL55-204ENST00000348259 TXNRD2Q9NNW7 524 aa11.85□□□□□ -0.51
MRPL55-204ENST00000348259 TTC28Q96AY4 2481 aa11.85□□□□□ -0.51
MRPL55-204ENST00000348259 POTEB2H3BUK9 544 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 PEX10O60683 326 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 IGHA2P01877 340 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 TIMM10P62072 90 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 ATP8B2P98198 1209 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 CHD1LQ86WJ1 897 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 DZIP1Q86YF9 867 aaKnown RBP11.84□□□□□ -0.51
MRPL55-204ENST00000348259 ZSCAN29Q8IWY8 852 aaPredicted RBP11.84□□□□□ -0.51
MRPL55-204ENST00000348259 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 COL25A1Q9BXS0 654 aaPredicted RBP11.84□□□□□ -0.51
MRPL55-204ENST00000348259 BACH2Q9BYV9 841 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
MRPL55-204ENST00000348259 RBM19Q9Y4C8 960 aaKnown RBP11.84□□□□□ -0.51
MRPL55-204ENST00000348259 USP17L5A8MUK1 530 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 UBTFL1P0CB47 393 aaPredicted RBP11.83□□□□□ -0.52
MRPL55-204ENST00000348259 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
MRPL55-204ENST00000348259 PDE4AP27815 886 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 MTX1Q13505 466 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 MORN1Q5T089 497 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 FAM109BQ6ICB4 259 aaPredicted RBP11.83□□□□□ -0.52
MRPL55-204ENST00000348259 XAGE2Q96GT9 111 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 GUCD1Q96NT3 240 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.83□□□□□ -0.52
MRPL55-204ENST00000348259 HMG20BQ9P0W2 317 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 RBPJLQ9UBG7 517 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 ABCF2Q9UG63 623 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.52
MRPL55-204ENST00000348259 A0A1B0GUL7 405 aa11.82□□□□□ -0.52
MRPL55-204ENST00000348259 ARID4AP29374 1257 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-204ENST00000348259 BACE1P56817 501 aa11.82□□□□□ -0.52
MRPL55-204ENST00000348259 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-204ENST00000348259 PABPC4Q13310 644 aaKnown RBP eCLIP11.82□□□□□ -0.524e-7■■■■□ 25.7
MRPL55-204ENST00000348259 LRRC26Q2I0M4 334 aa11.82□□□□□ -0.52
MRPL55-204ENST00000348259 SHROOM1Q2M3G4 852 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-204ENST00000348259 SPTY2D1Q68D10 685 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-204ENST00000348259 PI16Q6UXB8 463 aa11.82□□□□□ -0.52
MRPL55-204ENST00000348259 SOCS4Q8WXH5 440 aa11.82□□□□□ -0.52
MRPL55-204ENST00000348259 P2RX7Q99572 595 aaKnown RBP11.82□□□□□ -0.52
MRPL55-204ENST00000348259 HERC5Q9UII4 1024 aaKnown RBP11.82□□□□□ -0.52
MRPL55-204ENST00000348259 A0A0G2JMZ2 1700 aa11.81□□□□□ -0.52
MRPL55-204ENST00000348259 CYP2B6P20813 491 aa11.81□□□□□ -0.52
MRPL55-204ENST00000348259 HERVK_113P62684 666 aa11.81□□□□□ -0.52
MRPL55-204ENST00000348259 Q3C1V9 767 aa11.81□□□□□ -0.52
MRPL55-204ENST00000348259 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
MRPL55-204ENST00000348259 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
MRPL55-204ENST00000348259 UBE2OQ9C0C9 1292 aaKnown RBP11.81□□□□□ -0.52
MRPL55-204ENST00000348259 PORCNQ9H237 461 aa11.81□□□□□ -0.52
MRPL55-204ENST00000348259 MYH1P12882 1939 aa11.81□□□□□ -0.52
MRPL55-204ENST00000348259 CHD9Q3L8U1 2897 aa11.8□□□□□ -0.52
MRPL55-204ENST00000348259 CCND3P30281 292 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-204ENST00000348259 TFCP2Q12800 502 aa11.8□□□□□ -0.52
MRPL55-204ENST00000348259 MTMR2Q13614 643 aa11.8□□□□□ -0.52
MRPL55-204ENST00000348259 POLA2Q14181 598 aa11.8□□□□□ -0.52
MRPL55-204ENST00000348259 CCL14Q16627 93 aa11.8□□□□□ -0.52
MRPL55-204ENST00000348259 SKAP1Q86WV1 359 aa11.8□□□□□ -0.52
MRPL55-204ENST00000348259 TRMT44Q8IYL2 757 aaKnown RBP11.8□□□□□ -0.52
MRPL55-204ENST00000348259 NUDT12Q9BQG2 462 aa11.8□□□□□ -0.52
MRPL55-204ENST00000348259 CNMDO75829 334 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 MAPK4P31152 587 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 MCAMP43121 646 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 PPP4CP60510 307 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 ERVK-9P63128 1117 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 ERVK-24P63145 666 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 ANKRD45Q5TZF3 282 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 GPR142Q7Z601 462 aa11.79□□□□□ -0.52
MRPL55-204ENST00000348259 SPATA5Q8NB90 893 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms