RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 USP17L4A6NCW7 530 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 GOLGA6L4A6NEF3 574 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 F8W031 263 aaPredicted RBP29.34■■■□□ 2.29
TRADD-201ENST00000345057 DEXIO95424 95 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 MRE11P49959 708 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 USP17L1Q7RTZ2 530 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 TMEM63CQ9P1W3 806 aa29.34■■■□□ 2.29
TRADD-201ENST00000345057 MYH15Q9Y2K3 1946 aa29.33■■■□□ 2.29
TRADD-201ENST00000345057 TFAP4Q01664 338 aa29.33■■■□□ 2.29
TRADD-201ENST00000345057 FAM47AQ5JRC9 791 aa29.33■■■□□ 2.29
TRADD-201ENST00000345057 C16orf86Q6ZW13 317 aa29.33■■■□□ 2.29
TRADD-201ENST00000345057 SAP30BPQ9UHR5 308 aaKnown RBP29.33■■■□□ 2.29
TRADD-201ENST00000345057 LETM1O95202 739 aaPredicted RBP29.32■■■□□ 2.28
TRADD-201ENST00000345057 SOGA3Q5TF21 947 aa29.32■■■□□ 2.28
TRADD-201ENST00000345057 CRACR2BQ8N4Y2 399 aaPredicted RBP29.32■■■□□ 2.28
TRADD-201ENST00000345057 ANKS1AQ92625 1134 aa29.32■■■□□ 2.28
TRADD-201ENST00000345057 RNF26Q9BY78 433 aaPredicted RBP29.32■■■□□ 2.28
TRADD-201ENST00000345057 TSPY3P0CV98 308 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 TSPY8P0CW00 308 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 EVX2Q03828 476 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 R3HDM1Q15032 1099 aaKnown RBP29.31■■■□□ 2.28
TRADD-201ENST00000345057 PSMD1Q99460 953 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 TFIP11Q9UBB9 837 aaKnown RBP29.31■■■□□ 2.28
TRADD-201ENST00000345057 KIF13BQ9NQT8 1826 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 PSDA5PKW4 1024 aaPredicted RBP29.31■■■□□ 2.28
TRADD-201ENST00000345057 C21orf2O43822 256 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 PLCD1P51178 756 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 AKAP17AQ02040 695 aaKnown RBP29.31■■■□□ 2.28
TRADD-201ENST00000345057 TROAPQ12815 778 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 AOC3Q16853 763 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 DACT2Q5SW24 774 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 CTCFLQ8NI51 663 aaPredicted RBP29.31■■■□□ 2.28
TRADD-201ENST00000345057 DYNLL2Q96FJ2 89 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 VPS33BQ9H267 617 aa29.31■■■□□ 2.28
TRADD-201ENST00000345057 RBM27Q9P2N5 1060 aaKnown RBP29.31■■■□□ 2.28
TRADD-201ENST00000345057 PPIP5K2O43314 1243 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 POLD1P28340 1107 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 SLC4A8Q2Y0W8 1093 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 CCDC183Q5T5S1 534 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 ZDHHC15Q96MV8 337 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 MAP3K14Q99558 947 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 KAT14Q9H8E8 782 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 USP40Q9NVE5 1235 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 MYH1P12882 1939 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 CRKP46108 304 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 TGFB2P61812 414 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 KRT40Q6A162 431 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 NBPF11Q86T75 865 aa29.29■■■□□ 2.28
TRADD-201ENST00000345057 XBP1P17861 261 aa29.28■■■□□ 2.28
TRADD-201ENST00000345057 KIF5BP33176 963 aa29.28■■■□□ 2.28
TRADD-201ENST00000345057 CDK8P49336 464 aa29.28■■■□□ 2.28
TRADD-201ENST00000345057 KIF23Q02241 960 aaPredicted RBP29.28■■■□□ 2.28
TRADD-201ENST00000345057 RCOR1Q9UKL0 485 aa29.28■■■□□ 2.28
TRADD-201ENST00000345057 DPEP1P16444 411 aa29.27■■■□□ 2.28
TRADD-201ENST00000345057 GNL2Q13823 731 aaKnown RBP29.27■■■□□ 2.28
TRADD-201ENST00000345057 SAFBQ15424 915 aaKnown RBP eCLIP29.27■■■□□ 2.28
TRADD-201ENST00000345057 MXD3Q9BW11 206 aa29.27■■■□□ 2.28
TRADD-201ENST00000345057 RASA1P20936 1047 aa29.27■■■□□ 2.28
TRADD-201ENST00000345057 SCNN1DP51172 638 aa29.27■■■□□ 2.28
TRADD-201ENST00000345057 OTUD7BQ6GQQ9 843 aa29.27■■■□□ 2.28
TRADD-201ENST00000345057 MTFR1LQ9H019 292 aa29.26■■■□□ 2.27
TRADD-201ENST00000345057 GRPEL1Q9HAV7 217 aa29.26■■■□□ 2.27
TRADD-201ENST00000345057 SERPINA10Q9UK55 444 aa29.26■■■□□ 2.27
TRADD-201ENST00000345057 MYO3BQ8WXR4 1341 aa29.26■■■□□ 2.27
TRADD-201ENST00000345057 ECM29Q5VYK3 1845 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 NMT2O60551 498 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 WDHD1O75717 1129 aaPredicted RBP29.25■■■□□ 2.27
TRADD-201ENST00000345057 RCSD1Q6JBY9 416 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 APOBEC3HQ6NTF7 200 aaKnown RBP29.25■■■□□ 2.27
TRADD-201ENST00000345057 LRSAM1Q6UWE0 723 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 PRPF3O43395 683 aaKnown RBP29.25■■■□□ 2.27
TRADD-201ENST00000345057 MYSM1Q5VVJ2 828 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 CDC42EP5Q6NZY7 148 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 KIAA0825Q8IV33 1275 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 RTEL1Q9NZ71 1219 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 SWAP70Q9UH65 585 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 TAOK2Q9UL54 1235 aa29.25■■■□□ 2.27
TRADD-201ENST00000345057 KCNA3P22001 575 aa29.24■■■□□ 2.27
TRADD-201ENST00000345057 PICALMQ13492 652 aa29.24■■■□□ 2.27
TRADD-201ENST00000345057 TMTC3Q6ZXV5 915 aa29.24■■■□□ 2.27
TRADD-201ENST00000345057 NEDD1Q8NHV4 660 aa29.24■■■□□ 2.27
TRADD-201ENST00000345057 AIFM3Q96NN9 605 aa29.24■■■□□ 2.27
TRADD-201ENST00000345057 USP28Q96RU2 1077 aa29.24■■■□□ 2.27
TRADD-201ENST00000345057 KCNQ5Q9NR82 932 aa29.24■■■□□ 2.27
TRADD-201ENST00000345057 IL17RBQ9NRM6 502 aa29.24■■■□□ 2.27
TRADD-201ENST00000345057 HLA-DOAP06340 250 aa29.23■■■□□ 2.27
TRADD-201ENST00000345057 POLR3EQ9NVU0 708 aa29.23■■■□□ 2.27
TRADD-201ENST00000345057 U2AF2P26368 475 aaKnown RBP eCLIP29.23■■■□□ 2.27
TRADD-201ENST00000345057 GNAQP50148 359 aa29.23■■■□□ 2.27
TRADD-201ENST00000345057 PNMA1Q8ND90 353 aa29.23■■■□□ 2.27
TRADD-201ENST00000345057 OSBPL5Q9H0X9 879 aaPredicted RBP29.23■■■□□ 2.27
TRADD-201ENST00000345057 PIM2Q9P1W9 311 aa29.23■■■□□ 2.27
TRADD-201ENST00000345057 ZNF646O15015 1829 aaPredicted RBP29.23■■■□□ 2.27
TRADD-201ENST00000345057 SCN9AQ15858 1988 aa29.22■■■□□ 2.27
TRADD-201ENST00000345057 SYCE3A1L190 88 aa29.22■■■□□ 2.27
TRADD-201ENST00000345057 YEATS4O95619 227 aa29.22■■■□□ 2.27
TRADD-201ENST00000345057 GAS2L3Q86XJ1 694 aa29.22■■■□□ 2.27
TRADD-201ENST00000345057 SLC44A5Q8NCS7 719 aa29.22■■■□□ 2.27
TRADD-201ENST00000345057 NPM3O75607 178 aaKnown RBP29.21■■■□□ 2.27
TRADD-201ENST00000345057 MMP1P03956 469 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms