RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SBK1Q52WX2 424 aa14.12□□□□□ -0.15
SNCA-202ENST00000345009 KIAA1211Q6ZU35 1233 aa14.12□□□□□ -0.15
SNCA-202ENST00000345009 CDAN1Q8IWY9 1227 aa14.12□□□□□ -0.15
SNCA-202ENST00000345009 IFNL3Q8IZI9 196 aa14.12□□□□□ -0.15
SNCA-202ENST00000345009 PICK1Q9NRD5 415 aa14.12□□□□□ -0.15
SNCA-202ENST00000345009 SWAP70Q9UH65 585 aa14.12□□□□□ -0.15
SNCA-202ENST00000345009 MINDY4BA8MYZ0 360 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 CDC45O75419 566 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 ALX1Q15699 326 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 C12orf60Q5U649 245 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 CTR9Q6PD62 1173 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 CCDC129Q6ZRS4 1044 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 MOB2Q70IA6 237 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 METTL16Q86W50 562 aaKnown RBP14.11□□□□□ -0.15
SNCA-202ENST00000345009 SKAP1Q86WV1 359 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.11□□□□□ -0.15
SNCA-202ENST00000345009 GINM1Q9NU53 330 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 CTNNA3Q9UI47 895 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 ZNF112Q9UJU3 913 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 GTF3C3Q9Y5Q9 886 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 CEP350Q5VT06 3117 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 PAPPA2Q9BXP8 1791 aa14.11□□□□□ -0.15
SNCA-202ENST00000345009 HSPD1P10809 573 aaKnown RBP14.1□□□□□ -0.15
SNCA-202ENST00000345009 PLCD1P51178 756 aa14.1□□□□□ -0.15
SNCA-202ENST00000345009 PHF20L1A8MW92 1017 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 EIF5BO60841 1220 aaKnown RBP14.09□□□□□ -0.15
SNCA-202ENST00000345009 PDE4BQ07343 736 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 NOGQ13253 232 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 GRM1Q13255 1194 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 SLC4A8Q2Y0W8 1093 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 MAMSTRQ6ZN01 415 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 ZNF589Q86UQ0 364 aaPredicted RBP14.09□□□□□ -0.15
SNCA-202ENST00000345009 ERO1BQ86YB8 467 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 ZKSCAN4Q969J2 545 aaPredicted RBP14.09□□□□□ -0.15
SNCA-202ENST00000345009 CAPNS2Q96L46 248 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 DSCC1Q9BVC3 393 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 MKNK2Q9HBH9 465 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 CABP5Q9NP86 173 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.09□□□□□ -0.15
SNCA-202ENST00000345009 FZD1Q9UP38 647 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 SSC5DA1L4H1 1573 aa14.09□□□□□ -0.15
SNCA-202ENST00000345009 SGSM2O43147 1006 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 FGAP02671 866 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 ASNSP08243 561 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 ZBTB48P10074 688 aaPredicted RBP14.08□□□□□ -0.16
SNCA-202ENST00000345009 INPP5BP32019 993 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 MAP2K2P36507 400 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 HTRA3P83110 453 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 VGLL4Q14135 290 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 CERKLQ49MI3 558 aaPredicted RBP14.08□□□□□ -0.16
SNCA-202ENST00000345009 NOL9Q5SY16 702 aaKnown RBP14.08□□□□□ -0.16
SNCA-202ENST00000345009 TATDN1Q6P1N9 297 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.08□□□□□ -0.16
SNCA-202ENST00000345009 SCYL3Q8IZE3 742 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 CCDC17Q96LX7 622 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 ELP3Q9H9T3 547 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 SCUBE2Q9NQ36 999 aa14.08□□□□□ -0.16
SNCA-202ENST00000345009 MYH1P12882 1939 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 FAM196BA6NMK8 535 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 ZNF213O14771 459 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 CYP2D6P10635 497 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 CAP2P40123 477 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 PPATQ06203 517 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 VPS53Q5VIR6 699 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 CYP4F22Q6NT55 531 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 CLMNQ96JQ2 1002 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 EPB41L4AQ9HCS5 686 aaPredicted RBP14.07□□□□□ -0.16
SNCA-202ENST00000345009 ZMYM6O95789 1325 aa14.07□□□□□ -0.16
SNCA-202ENST00000345009 WDR33Q9C0J8 1336 aaKnown RBP14.07□□□□□ -0.16
SNCA-202ENST00000345009 FOCADQ5VW36 1801 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 SPDYE5A6NIY4 337 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 SLC10A3P09131 477 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 PCP11498 1178 aaKnown RBP14.06□□□□□ -0.16
SNCA-202ENST00000345009 CDK8P49336 464 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 VEGFBP49765 207 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 INHBEP58166 350 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 GABPAQ06546 454 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 PPARAQ07869 468 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 IMMTQ16891 758 aaKnown RBP14.06□□□□□ -0.16
SNCA-202ENST00000345009 ABCB5Q2M3G0 1257 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 C16orf86Q6ZW13 317 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
SNCA-202ENST00000345009 OPTNQ96CV9 577 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 RNF41Q9H4P4 317 aaPredicted RBP14.06□□□□□ -0.16
SNCA-202ENST00000345009 AS3MTQ9HBK9 375 aa14.06□□□□□ -0.16
SNCA-202ENST00000345009 CYP2D7A0A087X1C5 515 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 USP17L5A8MUK1 530 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 MPHOSPH10O00566 681 aaKnown RBP14.05□□□□□ -0.16
SNCA-202ENST00000345009 PTPRAP18433 802 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 NT5C2P49902 561 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 SPRYD7Q5W111 196 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 RASAL3Q86YV0 1011 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 DYNLL2Q96FJ2 89 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 OTUD5Q96G74 571 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 WNK4Q96J92 1243 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
SNCA-202ENST00000345009 ANAPC4Q9UJX5 808 aa14.05□□□□□ -0.16
SNCA-202ENST00000345009 SNCAIPQ9Y6H5 919 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms