RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 C16orf86Q6ZW13 317 aa24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 CABP5Q9NP86 173 aa24.81■■□□□ 1.56
SMARCB1-202ENST00000344921 ATAD5Q96QE3 1844 aa24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 MPHOSPH10O00566 681 aaKnown RBP24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 FGAP02671 866 aa24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 SLC3A2P08195 630 aaKnown RBP24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 PPARAQ07869 468 aa24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 ABCB5Q2M3G0 1257 aa24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 CCDC84Q86UT8 332 aaPredicted RBP24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 IL25Q9H293 177 aa24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 MKNK2Q9HBH9 465 aa24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 TAOK2Q9UL54 1235 aa24.8■■□□□ 1.56
SMARCB1-202ENST00000344921 MANSC4A6NHS7 340 aaPredicted RBP24.79■■□□□ 1.56
SMARCB1-202ENST00000344921 GTF2A2P52657 109 aa24.79■■□□□ 1.56
SMARCB1-202ENST00000344921 SREBF2Q12772 1141 aa24.79■■□□□ 1.56
SMARCB1-202ENST00000344921 ALX1Q15699 326 aa24.79■■□□□ 1.56
SMARCB1-202ENST00000344921 CASC1Q6TDU7 716 aa24.79■■□□□ 1.56
SMARCB1-202ENST00000344921 BEGAINQ9BUH8 593 aa24.79■■□□□ 1.56
SMARCB1-202ENST00000344921 MYH8P13535 1937 aa24.79■■□□□ 1.56
SMARCB1-202ENST00000344921 LAMB1P07942 1786 aa24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 GH2P01242 217 aa24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 REM2Q8IYK8 340 aaPredicted RBP24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 ZNF287Q9HBT7 754 aa24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 ZBTB21Q9ULJ3 1066 aa24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 USP17L5A8MUK1 530 aa24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 RAB3GAP1Q15042 981 aa24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 SHROOM1Q2M3G4 852 aaPredicted RBP24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 GINM1Q9NU53 330 aa24.78■■□□□ 1.56
SMARCB1-202ENST00000344921 THSD7BQ9C0I4 1608 aa24.77■■□□□ 1.56
SMARCB1-202ENST00000344921 SGSM2O43147 1006 aa24.77■■□□□ 1.56
SMARCB1-202ENST00000344921 JAG1P78504 1218 aa24.77■■□□□ 1.56
SMARCB1-202ENST00000344921 SNAPC2Q13487 334 aa24.77■■□□□ 1.56
SMARCB1-202ENST00000344921 DSCC1Q9BVC3 393 aa24.77■■□□□ 1.56
SMARCB1-202ENST00000344921 AS3MTQ9HBK9 375 aa24.77■■□□□ 1.56
SMARCB1-202ENST00000344921 TRIM75PA6NK02 468 aa24.76■■□□□ 1.55
SMARCB1-202ENST00000344921 CDC45O75419 566 aa24.76■■□□□ 1.55
SMARCB1-202ENST00000344921 INHBEP58166 350 aa24.76■■□□□ 1.55
SMARCB1-202ENST00000344921 CTDSPL2Q05D32 466 aa24.76■■□□□ 1.55
SMARCB1-202ENST00000344921 PDE4BQ07343 736 aa24.76■■□□□ 1.55
SMARCB1-202ENST00000344921 ROBO3Q96MS0 1386 aa24.76■■□□□ 1.55
SMARCB1-202ENST00000344921 CCL15-CCL14A0A0B4J2E2 113 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 CCL15Q16663 113 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 CCDC17Q96LX7 622 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 AFG3L2Q9Y4W6 797 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 PRDM1O75626 825 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 CETPP11597 493 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 KIAA1211Q6ZU35 1233 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 ZNF444Q8N0Y2 327 aaPredicted RBP24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 MS4A4AQ96JQ5 239 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 TBC1D2Q9BYX2 928 aa24.75■■□□□ 1.55
SMARCB1-202ENST00000344921 ZMYM6O95789 1325 aa24.74■■□□□ 1.55
SMARCB1-202ENST00000344921 TM4SF4P48230 202 aa24.74■■□□□ 1.55
SMARCB1-202ENST00000344921 HAND2P61296 217 aa24.74■■□□□ 1.55
SMARCB1-202ENST00000344921 SPP2Q13103 211 aa24.74■■□□□ 1.55
SMARCB1-202ENST00000344921 ZNF280CQ8ND82 737 aa24.74■■□□□ 1.55
SMARCB1-202ENST00000344921 CXCL11O14625 94 aa24.73■■□□□ 1.55
SMARCB1-202ENST00000344921 AKR1B1P15121 316 aa24.73■■□□□ 1.55
SMARCB1-202ENST00000344921 ESYT1Q9BSJ8 1104 aa24.73■■□□□ 1.55
SMARCB1-202ENST00000344921 WBP1LQ9NX94 342 aa24.73■■□□□ 1.55
SMARCB1-202ENST00000344921 CTNNA3Q9UI47 895 aa24.73■■□□□ 1.55
SMARCB1-202ENST00000344921 KCNH4Q9UQ05 1017 aa24.73■■□□□ 1.55
SMARCB1-202ENST00000344921 ZNF213O14771 459 aa24.72■■□□□ 1.55
SMARCB1-202ENST00000344921 SEPT2Q15019 361 aa24.72■■□□□ 1.55
SMARCB1-202ENST00000344921 TMEM179Q6ZVK1 233 aa24.72■■□□□ 1.55
SMARCB1-202ENST00000344921 TOMM22Q9NS69 142 aa24.72■■□□□ 1.55
SMARCB1-202ENST00000344921 ANAPC4Q9UJX5 808 aa24.72■■□□□ 1.55
SMARCB1-202ENST00000344921 OTUD7BQ6GQQ9 843 aa24.72■■□□□ 1.55
SMARCB1-202ENST00000344921 PHIPQ8WWQ0 1821 aa24.71■■□□□ 1.55
SMARCB1-202ENST00000344921 RASA1P20936 1047 aa24.71■■□□□ 1.55
SMARCB1-202ENST00000344921 PTH1RQ03431 593 aa24.71■■□□□ 1.55
SMARCB1-202ENST00000344921 IMMTQ16891 758 aaKnown RBP24.71■■□□□ 1.55
SMARCB1-202ENST00000344921 IFNL1Q8IU54 200 aa24.71■■□□□ 1.55
SMARCB1-202ENST00000344921 BRI3BPQ8WY22 251 aa24.71■■□□□ 1.55
SMARCB1-202ENST00000344921 HSPA1AP0DMV8 641 aaKnown RBP24.7■■□□□ 1.54
SMARCB1-202ENST00000344921 HSPA1BP0DMV9 641 aaKnown RBP24.7■■□□□ 1.54
SMARCB1-202ENST00000344921 WDR18Q9BV38 432 aa24.7■■□□□ 1.54
SMARCB1-202ENST00000344921 INCENPQ9NQS7 918 aa24.7■■□□□ 1.54
SMARCB1-202ENST00000344921 GTF3C3Q9Y5Q9 886 aa24.7■■□□□ 1.54
SMARCB1-202ENST00000344921 TESPA1A2RU30 521 aaPredicted RBP24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 USP17L10C9JJH3 530 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 TRPA1O75762 1119 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 GADL1Q6ZQY3 521 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 FEZ1Q99689 392 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 PTPN18Q99952 460 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 A0A0G2JLL6 359 aaPredicted RBP24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 IGF2BP3O00425 579 aaKnown RBP eCLIP24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 GUCY1A2P33402 732 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 MTMR2Q13614 643 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 RRP12Q5JTH9 1297 aaKnown RBP24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 FASTKD5Q7L8L6 764 aaKnown RBP24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 PRRT2Q7Z6L0 340 aaPredicted RBP24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 ANO2Q9NQ90 1003 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 RNF186Q9NXI6 227 aa24.69■■□□□ 1.54
SMARCB1-202ENST00000344921 TSPY3P0CV98 308 aa24.68■■□□□ 1.54
SMARCB1-202ENST00000344921 TSPY8P0CW00 308 aa24.68■■□□□ 1.54
SMARCB1-202ENST00000344921 HMGCS2P54868 508 aa24.68■■□□□ 1.54
SMARCB1-202ENST00000344921 MFSD6Q6ZSS7 791 aa24.68■■□□□ 1.54
SMARCB1-202ENST00000344921 U3KPZ7 1027 aaPredicted RBP24.68■■□□□ 1.54
SMARCB1-202ENST00000344921 RANBP6O60518 1105 aaKnown RBP24.67■■□□□ 1.54
SMARCB1-202ENST00000344921 ALDH1A1P00352 501 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms