RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 SLKQ9H2G2 1235 aaPredicted RBP9.54□□□□□ -0.88
HMGCR-202ENST00000343975 FAM198AQ9UFP1 575 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 PCDHAC2Q9Y5I4 1007 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 USP17L5A8MUK1 530 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 FAM184AQ8NB25 1140 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
HMGCR-202ENST00000343975 SCAF8Q9UPN6 1271 aaKnown RBP9.54□□□□□ -0.88
HMGCR-202ENST00000343975 CTNND1O60716 968 aaKnown RBP9.54□□□□□ -0.88
HMGCR-202ENST00000343975 GH2P01242 217 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 FAM47AQ5JRC9 791 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 C16orf86Q6ZW13 317 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 TBC1D2Q9BYX2 928 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 TM6SF1Q9BZW5 370 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 DDX4Q9NQI0 724 aaKnown RBP9.54□□□□□ -0.88
HMGCR-202ENST00000343975 FER1L6Q2WGJ9 1857 aa9.54□□□□□ -0.88
HMGCR-202ENST00000343975 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 ORC4O43929 436 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 XBP1P17861 261 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 ECE1P42892 770 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 GNL2Q13823 731 aaKnown RBP9.53□□□□□ -0.88
HMGCR-202ENST00000343975 EPB41L4AQ9HCS5 686 aaPredicted RBP9.53□□□□□ -0.88
HMGCR-202ENST00000343975 CLIP2Q9UDT6 1046 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 AK9Q5TCS8 1911 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 DDTLA6NHG4 134 aaPredicted RBP9.53□□□□□ -0.88
HMGCR-202ENST00000343975 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
HMGCR-202ENST00000343975 FSTL1Q12841 308 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 TRIM29Q14134 588 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 SNX14Q9Y5W7 946 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 MYH13Q9UKX3 1938 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 GOLGA8AA7E2F4 631 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 GOLGA8BA8MQT2 603 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 TTLL1O95922 423 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 TOP1P11387 765 aaKnown RBP9.53□□□□□ -0.88
HMGCR-202ENST00000343975 PLCD1P51178 756 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 ANAPC4Q9UJX5 808 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 COL4A1P02462 1669 aa9.53□□□□□ -0.88
HMGCR-202ENST00000343975 ZBTB43O43298 467 aa9.52□□□□□ -0.88
HMGCR-202ENST00000343975 EGFRP00533 1210 aa9.52□□□□□ -0.88
HMGCR-202ENST00000343975 IRX3P78415 501 aaPredicted RBP9.52□□□□□ -0.88
HMGCR-202ENST00000343975 NECTIN1Q15223 517 aa9.52□□□□□ -0.88
HMGCR-202ENST00000343975 SCYL3Q8IZE3 742 aa9.52□□□□□ -0.88
HMGCR-202ENST00000343975 SLC44A5Q8NCS7 719 aa9.52□□□□□ -0.88
HMGCR-202ENST00000343975 ZKSCAN3Q9BRR0 538 aa9.52□□□□□ -0.88
HMGCR-202ENST00000343975 SEC63Q9UGP8 760 aaKnown RBP9.52□□□□□ -0.88
HMGCR-202ENST00000343975 ZHX2Q9Y6X8 837 aa9.52□□□□□ -0.88
HMGCR-202ENST00000343975 TBC1D12O60347 775 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 SLC1A4P43007 532 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 ZNF157P51786 506 aaPredicted RBP9.52□□□□□ -0.89
HMGCR-202ENST00000343975 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
HMGCR-202ENST00000343975 ZYXQ15942 572 aaKnown RBP9.52□□□□□ -0.89
HMGCR-202ENST00000343975 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 ZNF384Q8TF68 577 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 BRF1Q92994 677 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 TTC14Q96N46 770 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 TBC1D32Q96NH3 1257 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 ZSCAN10Q96SZ4 725 aaPredicted RBP9.52□□□□□ -0.89
HMGCR-202ENST00000343975 KLF18A0A0U1RQI7 1052 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 GADL1Q6ZQY3 521 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 RUFY3Q7L099 469 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 MICU3Q86XE3 530 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 ERO1BQ86YB8 467 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 MTA3Q9BTC8 594 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 ZBTB21Q9ULJ3 1066 aa9.52□□□□□ -0.89
HMGCR-202ENST00000343975 TNKSO95271 1327 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 UBE2Q2LH0YL09 131 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 RPS6KB1P23443 525 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 SLC4A3P48751 1232 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 ZNF784Q8NCA9 323 aaPredicted RBP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 CCDC102AQ96A19 550 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 OTUD5Q96G74 571 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 ELP3Q9H9T3 547 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 ASTN2O75129 1339 aaPredicted RBP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 ARAP2Q8WZ64 1704 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 USP17L10C9JJH3 530 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 CAP2P40123 477 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 METAP2P50579 478 aaKnown RBP eCLIP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 Q6ZUG5 572 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 DGKHQ86XP1 1220 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 CHURC1Q8WUH1 139 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 ZBED3Q96IU2 234 aaPredicted RBP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 TANGO6Q9C0B7 1094 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 TMEM88BA6NKF7 163 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 PARP1P09874 1014 aaKnown RBP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 SEPT2Q15019 361 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 PPP2R5BQ15173 497 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 FASTKD5Q7L8L6 764 aaKnown RBP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 CHST3Q7LGC8 479 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 TBC1D10CQ8IV04 446 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
HMGCR-202ENST00000343975 PNMA3Q9UL41 463 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 LIMCH1Q9UPQ0 1083 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 CCDC88AQ3V6T2 1871 aa9.51□□□□□ -0.89
HMGCR-202ENST00000343975 TRIM75PA6NK02 468 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 AKR1B1P15121 316 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 SPP2Q13103 211 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 RTN1Q16799 776 aa9.5□□□□□ -0.89
HMGCR-202ENST00000343975 ZFPM1Q8IX07 1006 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms