RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TOB1P50616 345 aaPredicted RBP16.83■□□□□ 0.28
CLCN1-201ENST00000343257 FILIP1LQ4L180 1135 aa16.83■□□□□ 0.28
CLCN1-201ENST00000343257 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
CLCN1-201ENST00000343257 EPSTI1Q96J88 318 aa16.83■□□□□ 0.28
CLCN1-201ENST00000343257 CSRNP2Q9H175 543 aa16.83■□□□□ 0.28
CLCN1-201ENST00000343257 WWC3Q9ULE0 1092 aa16.83■□□□□ 0.28
CLCN1-201ENST00000343257 CTNND2Q9UQB3 1225 aa16.83■□□□□ 0.28
CLCN1-201ENST00000343257 CDHR2Q9BYE9 1310 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 EBAG9O00559 213 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 GPAA1O43292 621 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 HNRNPH1P31943 449 aaKnown RBP16.82■□□□□ 0.28
CLCN1-201ENST00000343257 TBC1D10CQ8IV04 446 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 DIS3L2Q8IYB7 885 aaKnown RBP16.82■□□□□ 0.28
CLCN1-201ENST00000343257 FAM76AQ8TAV0 307 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 ZKSCAN3Q9BRR0 538 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 NBPF3Q9H094 633 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 ANGEL1Q9UNK9 670 aaKnown RBP16.82■□□□□ 0.28
CLCN1-201ENST00000343257 TTF2Q9UNY4 1162 aaKnown RBP16.82■□□□□ 0.28
CLCN1-201ENST00000343257 GOLGA6CA6NDK9 693 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 GOLGA6DP0CG33 693 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 BLZF1Q9H2G9 400 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 GOLGA6AQ9NYA3 693 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 ADD3Q9UEY8 706 aaKnown RBP16.82■□□□□ 0.28
CLCN1-201ENST00000343257 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
CLCN1-201ENST00000343257 ZBTB43O43298 467 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 MYO1BO43795 1136 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 KRT9P35527 623 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 GNGT1P63211 74 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 CT47A1Q5JQC4 288 aaPredicted RBP16.81■□□□□ 0.28
CLCN1-201ENST00000343257 RRP12Q5JTH9 1297 aaKnown RBP16.81■□□□□ 0.28
CLCN1-201ENST00000343257 APOA5Q6Q788 366 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 APTXQ7Z2E3 356 aaKnown RBP16.81■□□□□ 0.28
CLCN1-201ENST00000343257 ZMYM6O95789 1325 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 IRAK1P51617 712 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 USP14P54578 494 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 EIF5P55010 431 aaKnown RBP16.81■□□□□ 0.28
CLCN1-201ENST00000343257 CCDC91Q7Z6B0 441 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 CXorf56Q9H5V9 222 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 FAM205CA6NFA0 338 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 C2orf54Q08AI8 447 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 FBXO2Q9UK22 296 aaPredicted RBP16.81■□□□□ 0.28
CLCN1-201ENST00000343257 UBN2Q6ZU65 1347 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 TMEM2Q9UHN6 1383 aa16.81■□□□□ 0.28
CLCN1-201ENST00000343257 hCG_1642624A0A1W2PR95 340 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 H0YHG0 523 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 SPATA1Q5VX52 437 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 NOSTRINQ8IVI9 506 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 OXER1Q8TDS5 423 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 CABP5Q9NP86 173 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 GNL3LQ9NVN8 582 aaKnown RBP16.8■□□□□ 0.28
CLCN1-201ENST00000343257 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
CLCN1-201ENST00000343257 CAPN7Q9Y6W3 813 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 A0A087X0B3 334 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 MAP2K2P36507 400 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 DPYDQ12882 1025 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 CNGA4Q8IV77 575 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 ANKRD20A12PQ8NF67 263 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 RRP36Q96EU6 259 aaKnown RBP16.8■□□□□ 0.28
CLCN1-201ENST00000343257 SELENOOQ9BVL4 669 aa16.8■□□□□ 0.28
CLCN1-201ENST00000343257 NAA15Q9BXJ9 866 aaKnown RBP16.8■□□□□ 0.28
CLCN1-201ENST00000343257 MYO1FO00160 1098 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 SARSP49591 514 aaKnown RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 RFX7Q2KHR2 1363 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 COG1Q8WTW3 980 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 PSMB7Q99436 277 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 ABHD10Q9NUJ1 306 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 PIK3C2AO00443 1686 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 CDKL5O76039 1030 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 INPP5BP32019 993 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 ATP1A2P50993 1020 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 SAFBQ15424 915 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 EZH2Q15910 746 aaKnown RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 RABL6Q3YEC7 729 aaPredicted RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 AMOTQ4VCS5 1084 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 TMEM67Q5HYA8 995 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 SND1Q7KZF4 910 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 AGPSO00116 658 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 ACTN4O43707 911 aaKnown RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 AMPD2Q01433 879 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 PPARAQ07869 468 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 JPH2Q9BR39 696 aaPredicted RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.79■□□□□ 0.28
CLCN1-201ENST00000343257 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
CLCN1-201ENST00000343257 GOLGA6BA6NDN3 693 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 KRT31Q15323 416 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 CCDC122Q5T0U0 273 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 KCTD16Q68DU8 428 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 FAM237AA0A1B0GTK4 181 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 ZEB2O60315 1214 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 FOXO4P98177 505 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 SLC7A5Q01650 507 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 WDR93Q6P2C0 686 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms