RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 PRRT2Q7Z6L0 340 aaPredicted RBP15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 CCDC136Q96JN2 1154 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 WDR18Q9BV38 432 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 AS3MTQ9HBK9 375 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 ROBO3Q96MS0 1386 aa15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 MFAP1P55081 439 aaKnown RBP15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 CERKLQ49MI3 558 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 C16orf86Q6ZW13 317 aa15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 FASTKD5Q7L8L6 764 aaKnown RBP15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 IFNL3Q8IZI9 196 aa15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 ZNF280CQ8ND82 737 aa15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 EPB41L4AQ9HCS5 686 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 ZBTB21Q9ULJ3 1066 aa15.65■□□□□ 0.1
HLA-DQA1-201ENST00000343139 GSPT1P15170 499 aaKnown RBP15.64■□□□□ 0.09
HLA-DQA1-201ENST00000343139 MOGSQ13724 837 aa15.64■□□□□ 0.09
HLA-DQA1-201ENST00000343139 ALX1Q15699 326 aa15.64■□□□□ 0.09
HLA-DQA1-201ENST00000343139 SLC4A8Q2Y0W8 1093 aa15.64■□□□□ 0.09
HLA-DQA1-201ENST00000343139 ANKRD23Q86SG2 305 aa15.64■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CCDC17Q96LX7 622 aa15.64■□□□□ 0.09
HLA-DQA1-201ENST00000343139 SLC45A1Q9Y2W3 748 aa15.64■□□□□ 0.09
HLA-DQA1-201ENST00000343139 ZMYM6O95789 1325 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 A0A0D9SFI3 127 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CYP2D6P10635 497 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 TDO2P48775 406 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 LBX1P52954 281 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 SH3D19Q5HYK7 790 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 PROCA1Q8NCQ7 364 aaPredicted RBP15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 FAM227BQ96M60 508 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 DOCK1Q14185 1865 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 NAV1Q8NEY1 1877 aa15.63■□□□□ 0.09
HLA-DQA1-201ENST00000343139 MYH1P12882 1939 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 C19orf81C9J6K1 198 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 BTBD19C9JJ37 291 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 FOXP2O15409 715 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 APPP05067 770 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 JAG1P78504 1218 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 NMIQ13287 307 aaPredicted RBP15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 ABCB5Q2M3G0 1257 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 ZNF287Q9HBT7 754 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CABP5Q9NP86 173 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 DIAPH3Q9NSV4 1193 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 GTF3C3Q9Y5Q9 886 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CCDC171Q6TFL3 1326 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 GDF11O95390 407 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 GH2P01242 217 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CDK8P49336 464 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 BACE1P56817 501 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 FAM43AQ8N2R8 423 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 NAPBQ9H115 298 aa15.62■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CYP2D7A0A087X1C5 515 aa15.61■□□□□ 0.09
HLA-DQA1-201ENST00000343139 TRIM75PA6NK02 468 aa15.61■□□□□ 0.09
HLA-DQA1-201ENST00000343139 EVX2Q03828 476 aa15.61■□□□□ 0.09
HLA-DQA1-201ENST00000343139 SPP2Q13103 211 aa15.61■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CCDC129Q6ZRS4 1044 aa15.61■□□□□ 0.09
HLA-DQA1-201ENST00000343139 TMEM179Q6ZVK1 233 aa15.61■□□□□ 0.09
HLA-DQA1-201ENST00000343139 DYNLL2Q96FJ2 89 aa15.61■□□□□ 0.09
HLA-DQA1-201ENST00000343139 ZFYVE28Q9HCC9 887 aa15.61■□□□□ 0.09
HLA-DQA1-201ENST00000343139 USP17L10C9JJH3 530 aa15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 TBC1D8O95759 1140 aa15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 HSPD1P10809 573 aaKnown RBP15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 GPAT2Q6NUI2 795 aa15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 ZNF589Q86UQ0 364 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 SLC44A5Q8NCS7 719 aa15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 PPP4R2Q9NY27 417 aa15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 ANAPC4Q9UJX5 808 aa15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 AGTPBP1Q9UPW5 1226 aa15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 RAD50Q92878 1312 aa15.6■□□□□ 0.09
HLA-DQA1-201ENST00000343139 GPR25O00155 361 aa15.59■□□□□ 0.09
HLA-DQA1-201ENST00000343139 SLC3A2P08195 630 aaKnown RBP15.59■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CRHR2Q13324 411 aa15.59■□□□□ 0.09
HLA-DQA1-201ENST00000343139 TAF1CQ15572 869 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQA1-201ENST00000343139 TSKSQ9UJT2 592 aa15.59■□□□□ 0.09
HLA-DQA1-201ENST00000343139 MINDY4BA8MYZ0 360 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 PDHXO00330 501 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 TLR2O60603 784 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 GUCY1A2P33402 732 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 USP14P54578 494 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 PDE4BQ07343 736 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 PPARAQ07869 468 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 SHROOM1Q2M3G4 852 aaPredicted RBP15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 BMP2KLQ5H9B9 411 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 VPS53Q5VIR6 699 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CWC27Q6UX04 472 aaKnown RBP15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 CCDC84Q86UT8 332 aaPredicted RBP15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 RUFY2Q8WXA3 655 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 C12orf42Q96LP6 360 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 KIAA1683Q9H0B3 1180 aa15.58■□□□□ 0.09
HLA-DQA1-201ENST00000343139 SMIM22K7EJ46 135 aa15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 FGAP02671 866 aa15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 CHMLP26374 656 aa15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 NT5C2P49902 561 aa15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 PABPC4Q13310 644 aaKnown RBP eCLIP15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 MTMR2Q13614 643 aa15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 RAB3GAP1Q15042 981 aa15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 PARK7Q99497 189 aaKnown RBP15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 DSCC1Q9BVC3 393 aa15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 MKNK2Q9HBH9 465 aa15.58■□□□□ 0.08
HLA-DQA1-201ENST00000343139 PHIPQ8WWQ0 1821 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms