RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
TPM3-207ENST00000341372 MROH7-TTC4A0A0A0MT08 1334 aa12.48□□□□□ -0.41
TPM3-207ENST00000341372 ZAP70P43403 619 aa12.48□□□□□ -0.41
TPM3-207ENST00000341372 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
TPM3-207ENST00000341372 RASA3Q14644 834 aa12.48□□□□□ -0.41
TPM3-207ENST00000341372 FAM83AQ86UY5 434 aa12.48□□□□□ -0.41
TPM3-207ENST00000341372 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
TPM3-207ENST00000341372 NF2P35240 595 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 VEGFBP49765 207 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 PRAMEF18Q5VWM3 479 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 CDC42EP5Q6NZY7 148 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 TEPSINQ96N21 525 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 LAMB1P07942 1786 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 ECE1P42892 770 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 TNNI2P48788 182 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 HUNKP57058 714 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 MAP3K11Q16584 847 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 TMOD2Q9NZR1 351 aa12.47□□□□□ -0.41
TPM3-207ENST00000341372 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
TPM3-207ENST00000341372 WDR33Q9C0J8 1336 aaKnown RBP12.46□□□□□ -0.41
TPM3-207ENST00000341372 FOCADQ5VW36 1801 aa12.46□□□□□ -0.41
TPM3-207ENST00000341372 ERCC5P28715 1186 aaPredicted RBP12.46□□□□□ -0.41
TPM3-207ENST00000341372 GSTO1P78417 241 aa12.46□□□□□ -0.41
TPM3-207ENST00000341372 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
TPM3-207ENST00000341372 USP17L2Q6R6M4 530 aa12.46□□□□□ -0.41
TPM3-207ENST00000341372 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.41
TPM3-207ENST00000341372 CLP1Q92989 425 aaKnown RBP12.46□□□□□ -0.41
TPM3-207ENST00000341372 CAPNS2Q96L46 248 aa12.46□□□□□ -0.41
TPM3-207ENST00000341372 PIH1D3Q9NQM4 214 aaKnown RBP12.46□□□□□ -0.41
TPM3-207ENST00000341372 PCDHGC3Q9UN70 934 aa12.46□□□□□ -0.41
TPM3-207ENST00000341372 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 TCP10L2B9ZVM9 353 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 MAP4K4O95819 1239 aaPredicted RBP12.45□□□□□ -0.42
TPM3-207ENST00000341372 CACNB3P54284 484 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
TPM3-207ENST00000341372 SUPT20HL1Q3ZLR7 823 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 CYP4F22Q6NT55 531 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 IDI2Q9BXS1 227 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 RAI14Q9P0K7 980 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 LRP2BPQ9P2M1 347 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 LDHCP07864 332 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 ATP5JP18859 108 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 BTDP43251 543 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 RHBDL3P58872 404 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 NBPF12Q5TAG4 269 aaPredicted RBP12.45□□□□□ -0.42
TPM3-207ENST00000341372 RGMBQ6NW40 437 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 TMEM39BQ9GZU3 492 aa12.45□□□□□ -0.42
TPM3-207ENST00000341372 COL2A1P02458 1487 aaPredicted RBP12.44□□□□□ -0.42
TPM3-207ENST00000341372 FAM155AB1AL88 458 aaPredicted RBP12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L21D6R901 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 NFIAQ12857 509 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 LDLRAD1Q5T700 205 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 MOB2Q70IA6 237 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 FAM151AQ8WW52 585 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 TSC1Q92574 1164 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 USP40Q9NVE5 1235 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 FAM198AQ9UFP1 575 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 MYH7P12883 1935 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 WDHD1O75717 1129 aaPredicted RBP12.44□□□□□ -0.42
TPM3-207ENST00000341372 SLC10A3P09131 477 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■■■□□ 15.5
TPM3-207ENST00000341372 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 NAA16Q6N069 864 aaPredicted RBP12.44□□□□□ -0.42
TPM3-207ENST00000341372 ARMC9Q7Z3E5 817 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 GCC1Q96CN9 775 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 ANTXR1Q9H6X2 564 aa12.44□□□□□ -0.42
TPM3-207ENST00000341372 FAM196BA6NMK8 535 aa12.43□□□□□ -0.42
TPM3-207ENST00000341372 ENTPD3O75355 529 aa12.43□□□□□ -0.42
TPM3-207ENST00000341372 MAP2K2P36507 400 aa12.43□□□□□ -0.42
TPM3-207ENST00000341372 PPP4CP60510 307 aa12.43□□□□□ -0.42
TPM3-207ENST00000341372 TTF1Q15361 905 aaPredicted RBP12.43□□□□□ -0.42
TPM3-207ENST00000341372 RASAL3Q86YV0 1011 aa12.43□□□□□ -0.42
TPM3-207ENST00000341372 HAUS7Q99871 368 aa12.43□□□□□ -0.42
TPM3-207ENST00000341372 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
TPM3-207ENST00000341372 ATRNL1Q5VV63 1379 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 PPP1R12BO60237 982 aaPredicted RBP12.42□□□□□ -0.42
TPM3-207ENST00000341372 NOGQ13253 232 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 ADGRA1Q86SQ6 560 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 DEPDC4Q8N2C3 294 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 BACH2Q9BYV9 841 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 ECHDC1Q9NTX5 307 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 ANGEL1Q9UNK9 670 aaKnown RBP12.42□□□□□ -0.42
TPM3-207ENST00000341372 PCNTO95613 3336 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 UBE2Q2LH0YL09 131 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms