RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 ANTXR2P58335 489 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 SART3Q15020 963 aaKnown RBP17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 MFSD6Q6ZSS7 791 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 TEX11Q8IYF3 940 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 STAG1Q8WVM7 1258 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 IDI2Q9BXS1 227 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 GDPD2Q9HCC8 539 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 DCP1AQ9NPI6 582 aaPredicted RBP17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 MYH15Q9Y2K3 1946 aa17.73■□□□□ 0.43
TUBB4B-201ENST00000340384 POTEIP0CG38 1075 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 POTEJP0CG39 1038 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 ATL3Q6DD88 541 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 GIMAP6Q6P9H5 292 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 DDX11Q96FC9 970 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 CNTNAP1P78357 1384 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 SH2B2O14492 632 aaPredicted RBP17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 PLCG2P16885 1265 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 MAPKAPK5Q8IW41 473 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 ZNF526Q8TF50 670 aaPredicted RBP17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 NOL10Q9BSC4 688 aaKnown RBP17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 CRNKL1Q9BZJ0 848 aaKnown RBP17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 TMEM63CQ9P1W3 806 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 PGAP2Q9UHJ9 254 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 CFAP45Q9UL16 551 aa17.72■□□□□ 0.43
TUBB4B-201ENST00000340384 CDK5RAP2Q96SN8 1893 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 FLT1P17948 1338 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 SCN4AP35499 1836 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 B4E1Z4 1266 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 CTDNEP1O95476 244 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 PCP11498 1178 aaKnown RBP17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 LIFRP42702 1097 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 CCDC183Q5T5S1 534 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 LRSAM1Q6UWE0 723 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 SYNE3Q6ZMZ3 975 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 USP50Q70EL3 339 aaPredicted RBP17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 CDAN1Q8IWY9 1227 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 ANAPC4Q9UJX5 808 aa17.71■□□□□ 0.43
TUBB4B-201ENST00000340384 ERICH2A1L162 156 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 IQCA1LA6NCM1 817 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 TCP10L2B9ZVM9 353 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 GADD45BO75293 160 aaPredicted RBP17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 RESTQ13127 1097 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 PICALMQ13492 652 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 TMEM67Q5HYA8 995 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 ANGEL2Q5VTE6 544 aaKnown RBP17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 FERMT3Q86UX7 667 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 CERS3Q8IU89 383 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 TMTC2Q8N394 836 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 ATP8A2Q9NTI2 1148 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 RBM27Q9P2N5 1060 aaKnown RBP17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 NEDD4P46934 1319 aa17.7■□□□□ 0.42
TUBB4B-201ENST00000340384 ECM29Q5VYK3 1845 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 CYP2D7A0A087X1C5 515 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 NPM3O75607 178 aaKnown RBP17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 CYP2D6P10635 497 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 VEGFAP15692 232 aaPredicted RBP17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 TCP10Q12799 353 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 CTR9Q6PD62 1173 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 DLK2Q6UY11 383 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 NFXL1Q6ZNB6 911 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 CYB5R4Q7L1T6 521 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 SGMS1Q86VZ5 419 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 GAS2L3Q86XJ1 694 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 NCOA5Q9HCD5 579 aaKnown RBP17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 TACC3Q9Y6A5 838 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 LAMB1P07942 1786 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 GOLGA6L4A6NEF3 574 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 CCDC69A6NI79 296 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 SLURP2P0DP57 97 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 USP5P45974 858 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 METAP2P50579 478 aaKnown RBP eCLIP17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 PPARAQ07869 468 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 FKBP1CQ5VVH2 108 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 SPATA32Q96LK8 384 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 ZNF396Q96N95 335 aaPredicted RBP17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 OSBPL5Q9H0X9 879 aaPredicted RBP17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 VEZTQ9HBM0 779 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 GGA3Q9NZ52 723 aa17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 SAP30BPQ9UHR5 308 aaKnown RBP17.69■□□□□ 0.42
TUBB4B-201ENST00000340384 FOCADQ5VW36 1801 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 DDTLA6NHG4 134 aaPredicted RBP17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 USP17L12C9JPN9 530 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 USP17L21D6R901 530 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 IFIT3O14879 490 aaKnown RBP17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 ZBTB43O43298 467 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 NT5C2P49902 561 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 PLCD1P51178 756 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 TEPSINQ96N21 525 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 HPS5Q9UPZ3 1129 aa17.68■□□□□ 0.42
TUBB4B-201ENST00000340384 DDX60LQ5H9U9 1706 aaKnown RBP17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 SYCE3A1L190 88 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 MYO1BO43795 1136 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 KDM4AO75164 1064 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 ENTPD3O75355 529 aa17.67■□□□□ 0.42
TUBB4B-201ENST00000340384 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms