RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
UBA1-201ENST00000335972 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 GNAT2P19087 354 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 STX17P56962 302 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 MYL5Q02045 173 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 CAVIN4Q5BKX8 364 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
UBA1-201ENST00000335972 SYT10Q6XYQ8 523 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 ESR2Q92731 530 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 NHSL1Q5SYE7 1610 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 DEXIO95424 95 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 SMYD4Q8IYR2 804 aaPredicted RBP17.04■□□□□ 0.32
UBA1-201ENST00000335972 LRRN4CLQ8ND94 238 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 IGSF3O75054 1194 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 CCDC94Q9BW85 323 aaPredicted RBP17.04■□□□□ 0.32
UBA1-201ENST00000335972 GNL3LQ9NVN8 582 aaKnown RBP17.04■□□□□ 0.32
UBA1-201ENST00000335972 MAN1B1Q9UKM7 699 aa17.04■□□□□ 0.32
UBA1-201ENST00000335972 ZSCAN10Q96SZ4 725 aaPredicted RBP17.03■□□□□ 0.32
UBA1-201ENST00000335972 RNF41Q9H4P4 317 aaPredicted RBP17.03■□□□□ 0.32
UBA1-201ENST00000335972 SEC23AQ15436 765 aa17.03■□□□□ 0.32
UBA1-201ENST00000335972 WASF1Q92558 559 aa17.03■□□□□ 0.32
UBA1-201ENST00000335972 AK7Q96M32 723 aa17.03■□□□□ 0.32
UBA1-201ENST00000335972 BAZ2AQ9UIF9 1905 aaKnown RBP17.03■□□□□ 0.32
UBA1-201ENST00000335972 A0A087X0B3 334 aa17.03■□□□□ 0.32
UBA1-201ENST00000335972 CTIFO43310 598 aaKnown RBP17.03■□□□□ 0.32
UBA1-201ENST00000335972 POSTNQ15063 836 aa17.03■□□□□ 0.32
UBA1-201ENST00000335972 NYAP1Q6ZVC0 841 aa17.03■□□□□ 0.32
UBA1-201ENST00000335972 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
UBA1-201ENST00000335972 ZNF652Q9Y2D9 606 aa17.03■□□□□ 0.32
UBA1-201ENST00000335972 MYH2Q9UKX2 1941 aa17.02■□□□□ 0.32
UBA1-201ENST00000335972 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
UBA1-201ENST00000335972 MECOMQ03112 1051 aa17.02■□□□□ 0.32
UBA1-201ENST00000335972 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
UBA1-201ENST00000335972 PPP1R13BQ96KQ4 1090 aa17.02■□□□□ 0.32
UBA1-201ENST00000335972 NEMFO60524 1076 aa17.02■□□□□ 0.32
UBA1-201ENST00000335972 PKN1Q16512 942 aa17.02■□□□□ 0.32
UBA1-201ENST00000335972 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
UBA1-201ENST00000335972 BPIFA3Q9BQP9 254 aa17.02■□□□□ 0.32
UBA1-201ENST00000335972 GSDMDP57764 484 aa17.02■□□□□ 0.31
UBA1-201ENST00000335972 TIGD1Q96MW7 591 aa17.02■□□□□ 0.31
UBA1-201ENST00000335972 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.02■□□□□ 0.31
UBA1-201ENST00000335972 SAMSN1Q9NSI8 373 aaKnown RBP17.02■□□□□ 0.31
UBA1-201ENST00000335972 ECM29Q5VYK3 1845 aa17.01■□□□□ 0.31
UBA1-201ENST00000335972 PTPREP23469 700 aa17.01■□□□□ 0.31
UBA1-201ENST00000335972 CREBRFQ8IUR6 639 aa17.01■□□□□ 0.31
UBA1-201ENST00000335972 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
UBA1-201ENST00000335972 NFE2L3Q9Y4A8 694 aa17.01■□□□□ 0.31
UBA1-201ENST00000335972 STK36Q9NRP7 1315 aa17.01■□□□□ 0.31
UBA1-201ENST00000335972 NBPF5PQ86XG9 351 aaPredicted RBP17.01■□□□□ 0.31
UBA1-201ENST00000335972 C8orf37Q96NL8 207 aa17.01■□□□□ 0.31
UBA1-201ENST00000335972 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
UBA1-201ENST00000335972 CDC25AP30304 524 aa17■□□□□ 0.31
UBA1-201ENST00000335972 ADKP55263 362 aaKnown RBP17■□□□□ 0.31
UBA1-201ENST00000335972 MTERF4Q7Z6M4 381 aaKnown RBP17■□□□□ 0.31
UBA1-201ENST00000335972 CATIPQ7Z7H3 387 aa17■□□□□ 0.31
UBA1-201ENST00000335972 COL16A1Q07092 1604 aaPredicted RBP17■□□□□ 0.31
UBA1-201ENST00000335972 CCDC196A0A1B0GTZ2 297 aa17■□□□□ 0.31
UBA1-201ENST00000335972 MDM2Q00987 491 aaPredicted RBP17■□□□□ 0.31
UBA1-201ENST00000335972 RILPL1Q5EBL4 403 aa17■□□□□ 0.31
UBA1-201ENST00000335972 ANKRD7Q92527 254 aa17■□□□□ 0.31
UBA1-201ENST00000335972 PAXBP1Q9Y5B6 917 aa17■□□□□ 0.31
UBA1-201ENST00000335972 USP17L8P0C7I0 530 aa17■□□□□ 0.31
UBA1-201ENST00000335972 SMARCE1Q969G3 411 aa17■□□□□ 0.31
UBA1-201ENST00000335972 MED15Q96RN5 788 aa17■□□□□ 0.31
UBA1-201ENST00000335972 FOXP1Q9H334 677 aaPredicted RBP17■□□□□ 0.31
UBA1-201ENST00000335972 COL14A1Q05707 1796 aaKnown RBP17■□□□□ 0.31
UBA1-201ENST00000335972 VWA3AA6NCI4 1184 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 GNPATO15228 680 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
UBA1-201ENST00000335972 ELF2Q15723 593 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 BSDC1Q9NW68 430 aaPredicted RBP16.99■□□□□ 0.31
UBA1-201ENST00000335972 CHD4Q14839 1912 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
UBA1-201ENST00000335972 DYNLL2Q96FJ2 89 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 IKBKBO14920 756 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 SRBD1Q8N5C6 995 aaKnown RBP16.99■□□□□ 0.31
UBA1-201ENST00000335972 RASGRP4Q8TDF6 673 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 CPLX3Q8WVH0 158 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 BLZF1Q9H2G9 400 aa16.99■□□□□ 0.31
UBA1-201ENST00000335972 EP400Q96L91 3159 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 TRIM75PA6NK02 468 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 UBE4AQ14139 1066 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 IQCA1Q86XH1 822 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 KIF18AQ8NI77 898 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
UBA1-201ENST00000335972 IMPACTQ9P2X3 320 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 LRP5O75197 1615 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 CICQ96RK0 1608 aaPredicted RBP16.98■□□□□ 0.31
UBA1-201ENST00000335972 RASGRP2Q7LDG7 609 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 CCDC150Q8NCX0 1101 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 SYMPKQ92797 1274 aaKnown RBP16.98■□□□□ 0.31
UBA1-201ENST00000335972 GPKOWQ92917 476 aaPredicted RBP eCLIP16.98■□□□□ 0.315e-6■■■□□ 15.2
UBA1-201ENST00000335972 DNAI1Q9UI46 699 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms