RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LPIN2Q92539 896 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 WDR24Q96S15 920 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 PPP2R2CQ9Y2T4 447 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 KIF20AO95235 890 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 IFNAR1P17181 557 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 CDK11BP21127 795 aaKnown RBP14.11□□□□□ -0.15
VPS33B-201ENST00000333371 LIFRP42702 1097 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 KCNJ6P48051 423 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 SDR42E1Q8WUS8 393 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 CABP5Q9NP86 173 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 FAM53CQ9NYF3 392 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 COBLO75128 1261 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 SEC31AO94979 1220 aaKnown RBP14.11□□□□□ -0.15
VPS33B-201ENST00000333371 UQCRFS1P1P0C7P4 283 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 MTF1Q14872 753 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 WTAPQ15007 396 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 TERF2Q15554 542 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 EARS2Q5JPH6 523 aaKnown RBP14.11□□□□□ -0.15
VPS33B-201ENST00000333371 SUSD4Q5VX71 490 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 SMARCC1Q92922 1105 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-201ENST00000333371 PARP3Q9Y6F1 533 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 A0A0U1RQJ8 604 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 WNT7AO00755 349 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 PRDM1O75626 825 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 PTPREP23469 700 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 MAP3K12Q12852 859 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 ITPK1Q13572 414 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 ADGRA1Q86SQ6 560 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 TC2NQ8N9U0 490 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 ATRIPQ8WXE1 791 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 IRX2Q9BZI1 471 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-201ENST00000333371 CSRNP2Q9H175 543 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 FHOD1Q9Y613 1164 aa14.11□□□□□ -0.15
VPS33B-201ENST00000333371 BAZ2AQ9UIF9 1905 aaKnown RBP14.11□□□□□ -0.15
VPS33B-201ENST00000333371 A0A087X0B3 334 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 MINDY4BA8MYZ0 360 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 STX17P56962 302 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 GABPB1Q06547 395 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 KARSQ15046 597 aaKnown RBP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 SAFBQ15424 915 aaKnown RBP eCLIP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 FAM98CQ17RN3 349 aaKnown RBP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 NOM1Q5C9Z4 860 aaKnown RBP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 BAG1Q99933 345 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 PHLPP2Q6ZVD8 1323 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 DOCK2Q92608 1830 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 AFMP43652 599 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 ALX1Q15699 326 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 KLHL10Q6JEL2 608 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 SMYD4Q8IYR2 804 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 CRACR2BQ8N4Y2 399 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 ZBTB9Q96C00 473 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 AK7Q96M32 723 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 C8orf37Q96NL8 207 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 NIP7Q9Y221 180 aaKnown RBP eCLIP14.1□□□□□ -0.15
VPS33B-201ENST00000333371 MYH8P13535 1937 aa14.1□□□□□ -0.15
VPS33B-201ENST00000333371 STK36Q9NRP7 1315 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 MYH14Q7Z406 1995 aaKnown RBP14.09□□□□□ -0.15
VPS33B-201ENST00000333371 CYP2D7A0A087X1C5 515 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 TEX33O43247 280 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 GNG11P61952 73 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 TBX2Q13207 712 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-201ENST00000333371 PARP10Q53GL7 1025 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 TRIM22Q8IYM9 498 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 MNS1Q8NEH6 495 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 UBXN4Q92575 508 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 SMARCE1Q969G3 411 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 EPSTI1Q96J88 318 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 MPHOSPH8Q99549 860 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 VPS54Q9P1Q0 977 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 ERICH4A6NGS2 130 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 KCNQ2O43526 872 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 CAMTA2O94983 1202 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 SLC5A1P13866 664 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 ZNF18P17022 549 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 ZNF654Q8IZM8 581 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 CPLX3Q8WVH0 158 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 STAMQ92783 540 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 DHX58Q96C10 678 aa14.09□□□□□ -0.15
VPS33B-201ENST00000333371 TAF1P21675 1872 aa14.08□□□□□ -0.15
VPS33B-201ENST00000333371 ARHGAP6O43182 974 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 ACTN4O43707 911 aaKnown RBP14.08□□□□□ -0.16
VPS33B-201ENST00000333371 TADA3O75528 432 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 MORC3Q14149 939 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 MROH5Q6ZUA9 1318 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 UBAP1LF5GYI3 381 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 PNMA6AP0CW24 399 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-201ENST00000333371 SARSP49591 514 aaKnown RBP14.08□□□□□ -0.16
VPS33B-201ENST00000333371 EVX2Q03828 476 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 KRT23Q9C075 422 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 LRP2BPQ9P2M1 347 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 ZNF652Q9Y2D9 606 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 COL4A1P02462 1669 aa14.08□□□□□ -0.16
VPS33B-201ENST00000333371 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
VPS33B-201ENST00000333371 SPECC1LQ69YQ0 1117 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 CNNM2Q9H8M5 875 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 SOWAHDA6NJG2 315 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 DEXIO95424 95 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms