RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 MED23Q9ULK4 1368 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 CTNNA2P26232 953 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 ADCY7P51828 1080 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 NCAPH2Q6IBW4 605 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 KIF5AQ12840 1032 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 MAEAQ7L5Y9 396 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 LARGE2Q8N3Y3 721 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 MCM6Q14566 821 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 NONOQ15233 471 aaKnown RBP eCLIP14.64□□□□□ -0.07
VSTM4-202ENST00000332853 SYNE4Q8N205 404 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 FERMT2Q96AC1 680 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 GTF2F1P35269 517 aaKnown RBP eCLIP14.64□□□□□ -0.07
VSTM4-202ENST00000332853 RAPGEF1Q13905 1077 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 ADALQ6DHV7 355 aa14.64□□□□□ -0.07
VSTM4-202ENST00000332853 MYO3AQ8NEV4 1616 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 BTBD18B2RXH4 712 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 PHACTR2O75167 634 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 BMS1Q14692 1282 aaKnown RBP14.63□□□□□ -0.07
VSTM4-202ENST00000332853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.63□□□□□ -0.07
VSTM4-202ENST00000332853 SPATA31A3Q5VYP0 1347 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 TACC1O75410 805 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 TERF1P54274 439 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 KRT83P78385 493 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 LONRF3Q496Y0 759 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 CCDC65Q8IXS2 484 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 NFE2L3Q9Y4A8 694 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 ZNF804BA4D1E1 1349 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 RHOXF2BP0C7M4 288 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 LRRC47Q8N1G4 583 aaKnown RBP14.63□□□□□ -0.07
VSTM4-202ENST00000332853 TRERF1Q96PN7 1200 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 RHOXF2Q9BQY4 288 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 FTOQ9C0B1 505 aaKnown RBP eCLIP14.63□□□□□ -0.07
VSTM4-202ENST00000332853 INO80Q9ULG1 1556 aaPredicted RBP14.63□□□□□ -0.07
VSTM4-202ENST00000332853 DIP2CQ9Y2E4 1556 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 PAK1Q13153 545 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 NBPF14Q5TI25 921 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 TAB2Q9NYJ8 693 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 PCDHA7Q9UN72 937 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 KRT86O43790 486 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 BTDP43251 543 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 PRKG1Q13976 671 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 SNX29Q8TEQ0 813 aa14.63□□□□□ -0.07
VSTM4-202ENST00000332853 NDUFA8P51970 172 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 TBC1D8BQ0IIM8 1120 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 UBE3CQ15386 1083 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 CALCRLQ16602 461 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 ZFP91Q96JP5 570 aaPredicted RBP14.62□□□□□ -0.07
VSTM4-202ENST00000332853 ARHGEF10LQ9HCE6 1279 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 GPR108Q9NPR9 543 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 PNPLA6Q8IY17 1366 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 SMCO2A6NFE2 343 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 CKAP4Q07065 602 aaKnown RBP14.62□□□□□ -0.07
VSTM4-202ENST00000332853 CSGALNACT2Q8N6G5 542 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 ADD2P35612 726 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 LRWD1Q9UFC0 647 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 GRM1Q13255 1194 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 IFI16Q16666 785 aaKnown RBP14.62□□□□□ -0.07
VSTM4-202ENST00000332853 SUSD4Q5VX71 490 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 CABP7Q86V35 215 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 HOMER2Q9NSB8 354 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 SRP68Q9UHB9 627 aaKnown RBP14.62□□□□□ -0.07
VSTM4-202ENST00000332853 GJC1P36383 396 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 CNGA4Q8IV77 575 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 PTPRMP28827 1452 aa14.62□□□□□ -0.07
VSTM4-202ENST00000332853 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 CCDC172P0C7W6 258 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 LCORLQ8N3X6 602 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 LMAN1P49257 510 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 ZNF827Q17R98 1081 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 HS2ST1Q7LGA3 356 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 KIAA0825Q8IV33 1275 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 FNBP4Q8N3X1 1017 aaPredicted RBP14.61□□□□□ -0.07
VSTM4-202ENST00000332853 A0A087WWV3 80 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 CPXCR1Q8N123 301 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 NELFBQ8WX92 580 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 SHTN1A0MZ66 631 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 FAM170AA1A519 330 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 TRIM37O94972 964 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 ALDH1B1P30837 517 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 MTX1Q13505 466 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 CNNM4Q6P4Q7 775 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 FAM196AQ6ZSG2 479 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 KRT25Q7Z3Z0 450 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 PNMA1Q8ND90 353 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 GOLGA1Q92805 767 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 BACH1O14867 736 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 PPP2R5BQ15173 497 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 MLKLQ8NB16 471 aa14.61□□□□□ -0.07
VSTM4-202ENST00000332853 XPO4Q9C0E2 1151 aaKnown RBP14.61□□□□□ -0.07
VSTM4-202ENST00000332853 PPIP5K2O43314 1243 aa14.6□□□□□ -0.07
VSTM4-202ENST00000332853 CCDC122Q5T0U0 273 aa14.6□□□□□ -0.07
VSTM4-202ENST00000332853 NSUN7Q8NE18 718 aaKnown RBP14.6□□□□□ -0.07
VSTM4-202ENST00000332853 MPHOSPH6Q99547 160 aaKnown RBP14.6□□□□□ -0.07
VSTM4-202ENST00000332853 ARFGAP3Q9NP61 516 aa14.6□□□□□ -0.07
VSTM4-202ENST00000332853 KIAA1468Q9P260 1216 aa14.6□□□□□ -0.07
VSTM4-202ENST00000332853 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
VSTM4-202ENST00000332853 NEXMIFQ5QGS0 1516 aa14.6□□□□□ -0.07
VSTM4-202ENST00000332853 MYCLP12524 364 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms