RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 KIF11P52732 1056 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 HSPA2P54652 639 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 SLC9C1Q4G0N8 1177 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 UIMC1Q96RL1 719 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 ARMT1Q9H993 441 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 PPP2R5BQ15173 497 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 HS1BP3Q53T59 392 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 A6NNZ2 444 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 TUBB8Q3ZCM7 444 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 DDX17Q92841 729 aaKnown RBP17.14■□□□□ 0.33
PTPN21-201ENST00000328736 NUF2Q9BZD4 464 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 MAP3K19Q56UN5 1328 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 EYA2O00167 538 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 CUTAO60888 179 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 SARNPP82979 210 aaKnown RBP17.14■□□□□ 0.33
PTPN21-201ENST00000328736 NONOQ15233 471 aaKnown RBP eCLIP17.14■□□□□ 0.33
PTPN21-201ENST00000328736 UTP14CQ5TAP6 766 aaKnown RBP17.14■□□□□ 0.33
PTPN21-201ENST00000328736 ANO1Q5XXA6 986 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 DPP8Q6V1X1 898 aaPredicted RBP17.14■□□□□ 0.33
PTPN21-201ENST00000328736 VCXQ9H320 206 aa17.14■□□□□ 0.33
PTPN21-201ENST00000328736 GOLGA6CA6NDK9 693 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 GOLGA6BA6NDN3 693 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 I3L4J1 428 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 GCP02774 474 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 GOLGA6DP0CG33 693 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 TTC38Q5R3I4 469 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 CCDC62Q6P9F0 684 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 ARHGAP24Q8N264 748 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 VPS16Q9H269 839 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 LGR6Q9HBX8 967 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 GOLGA6AQ9NYA3 693 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 NOC2LQ9Y3T9 749 aaKnown RBP17.13■□□□□ 0.33
PTPN21-201ENST00000328736 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.13■□□□□ 0.33
PTPN21-201ENST00000328736 CTTNBP2NLQ9P2B4 639 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 AFAP1L1Q8TED9 768 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 SECISBP2LQ93073 1101 aaKnown RBP17.13■□□□□ 0.33
PTPN21-201ENST00000328736 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 A0A1B0GUL7 405 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 MYCT1Q8N699 235 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 NCOA5Q9HCD5 579 aaKnown RBP17.13■□□□□ 0.33
PTPN21-201ENST00000328736 KCNH3Q9ULD8 1083 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 GINS2Q9Y248 185 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 FAM227BQ96M60 508 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 TSKSQ9UJT2 592 aa17.13■□□□□ 0.33
PTPN21-201ENST00000328736 HMGB1P1B2RPK0 211 aaPredicted RBP17.12■□□□□ 0.33
PTPN21-201ENST00000328736 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPN21-201ENST00000328736 DDX39AO00148 427 aaKnown RBP17.12■□□□□ 0.33
PTPN21-201ENST00000328736 KIF3CO14782 793 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 HHATQ5VTY9 493 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 CEP120Q8N960 986 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 SNX29Q8TEQ0 813 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 PLCB1Q9NQ66 1216 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 KRT19P08727 400 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 SLC1A4P43007 532 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 KIAA0556O60303 1618 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 IRX5P78411 483 aaPredicted RBP17.12■□□□□ 0.33
PTPN21-201ENST00000328736 ASIC3Q9UHC3 531 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 MRRFQ96E11 262 aaKnown RBP17.12■□□□□ 0.33
PTPN21-201ENST00000328736 SPC25Q9HBM1 224 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 LRWD1Q9UFC0 647 aa17.12■□□□□ 0.33
PTPN21-201ENST00000328736 KCNA6P17658 529 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 TNNI3KQ59H18 835 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 FAM173BQ6P4H8 233 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 OTUD6AQ7L8S5 288 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 APPBP2Q92624 585 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 ANGEL1Q9UNK9 670 aaKnown RBP17.11■□□□□ 0.33
PTPN21-201ENST00000328736 FPGT-TNNI3KV9GXZ4 949 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 SLC12A2P55011 1212 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
PTPN21-201ENST00000328736 CALCRLQ16602 461 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 SMC5Q8IY18 1101 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 FAM114A2Q9NRY5 505 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 USTQ9Y2C2 406 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 HPDP32754 393 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-201ENST00000328736 PPP2R5DQ14738 602 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-201ENST00000328736 EXOC3O60645 756 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 RUFY4Q6ZNE9 571 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 LMNTD2Q8IXW0 634 aa17.11■□□□□ 0.33
PTPN21-201ENST00000328736 METTL22Q9BUU2 404 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-201ENST00000328736 SLC27A2O14975 620 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 EVCP57679 992 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 IRX3P78415 501 aaPredicted RBP17.1■□□□□ 0.33
PTPN21-201ENST00000328736 OTUD7BQ6GQQ9 843 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 NLRX1Q86UT6 975 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 IP6K1Q92551 441 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 MLKLQ8NB16 471 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 IQCDQ96DY2 449 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 NCAPGQ9BPX3 1015 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 AS3MTQ9HBK9 375 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 FLOT1O75955 427 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 CLCN1P35523 988 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms